Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Col8a2P25318 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.66□□□□□ -0.54
Col8a2P25318 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col8a2P25318 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col8a2P25318 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col8a2P25318 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col8a2P25318 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Col8a2P25318 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col8a2P25318 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col8a2P25318 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.66□□□□□ -0.54
Col8a2P25318 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.66□□□□□ -0.54
Col8a2P25318 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.66□□□□□ -0.54
Col8a2P25318 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.66□□□□□ -0.54
Col8a2P25318 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.66□□□□□ -0.54
Col8a2P25318 Gm7653-201ENSMUST00000214567 508 ntBASIC11.66□□□□□ -0.54
Col8a2P25318 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.66□□□□□ -0.54
Col8a2P25318 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.66□□□□□ -0.54
Col8a2P25318 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col8a2P25318 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col8a2P25318 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col8a2P25318 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col8a2P25318 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.66□□□□□ -0.54
Col8a2P25318 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col8a2P25318 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col8a2P25318 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Col8a2P25318 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col8a2P25318 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col8a2P25318 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col8a2P25318 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Col8a2P25318 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col8a2P25318 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col8a2P25318 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Col8a2P25318 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col8a2P25318 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col8a2P25318 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col8a2P25318 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.65□□□□□ -0.54
Col8a2P25318 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col8a2P25318 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Col8a2P25318 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.65□□□□□ -0.54
Col8a2P25318 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col8a2P25318 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col8a2P25318 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col8a2P25318 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col8a2P25318 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Col8a2P25318 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col8a2P25318 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col8a2P25318 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col8a2P25318 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col8a2P25318 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Col8a2P25318 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.65□□□□□ -0.54
Col8a2P25318 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col8a2P25318 Gm6745-201ENSMUST00000199216 526 ntBASIC11.65□□□□□ -0.54
Col8a2P25318 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.65□□□□□ -0.54
Col8a2P25318 Gm9908-201ENSMUST00000211534 448 ntBASIC11.65□□□□□ -0.54
Col8a2P25318 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.65□□□□□ -0.54
Col8a2P25318 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Col8a2P25318 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Col8a2P25318 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col8a2P25318 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col8a2P25318 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col8a2P25318 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Col8a2P25318 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.55
Col8a2P25318 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Col8a2P25318 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Col8a2P25318 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Col8a2P25318 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Col8a2P25318 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col8a2P25318 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Col8a2P25318 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col8a2P25318 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col8a2P25318 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col8a2P25318 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col8a2P25318 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col8a2P25318 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.64□□□□□ -0.55
Col8a2P25318 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.64□□□□□ -0.55
Col8a2P25318 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col8a2P25318 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col8a2P25318 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col8a2P25318 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col8a2P25318 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col8a2P25318 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col8a2P25318 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col8a2P25318 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col8a2P25318 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col8a2P25318 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col8a2P25318 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col8a2P25318 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col8a2P25318 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col8a2P25318 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Col8a2P25318 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col8a2P25318 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col8a2P25318 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col8a2P25318 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.64□□□□□ -0.55
Col8a2P25318 Gm15678-201ENSMUST00000117573 960 ntBASIC11.64□□□□□ -0.55
Col8a2P25318 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.64□□□□□ -0.55
Col8a2P25318 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.64□□□□□ -0.55
Col8a2P25318 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col8a2P25318 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.64□□□□□ -0.55
Col8a2P25318 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.64□□□□□ -0.55
Col8a2P25318 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms