Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.71□□□□□ -0.53
Tnfrsf1aP25118 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf1aP25118 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf1aP25118 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf1aP25118 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf1aP25118 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Tnfrsf1aP25118 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Tnfrsf1aP25118 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.71□□□□□ -0.53
Tnfrsf1aP25118 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.71□□□□□ -0.53
Tnfrsf1aP25118 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.71□□□□□ -0.53
Tnfrsf1aP25118 Gm9824-201ENSMUST00000178707 561 ntBASIC11.71□□□□□ -0.53
Tnfrsf1aP25118 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf1aP25118 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf1aP25118 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf1aP25118 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Tnfrsf1aP25118 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf1aP25118 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Tnfrsf1aP25118 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Tnfrsf1aP25118 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.71□□□□□ -0.54
Tnfrsf1aP25118 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Tnfrsf1aP25118 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.71□□□□□ -0.54
Tnfrsf1aP25118 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.71□□□□□ -0.54
Tnfrsf1aP25118 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfrsf1aP25118 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.71□□□□□ -0.54
Tnfrsf1aP25118 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Tnfrsf1aP25118 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfrsf1aP25118 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfrsf1aP25118 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfrsf1aP25118 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfrsf1aP25118 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfrsf1aP25118 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfrsf1aP25118 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.71□□□□□ -0.54
Tnfrsf1aP25118 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 Gm15957-201ENSMUST00000118893 974 ntBASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 Gm13365-201ENSMUST00000121188 973 ntBASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 Gm8116-201ENSMUST00000182917 1201 ntBASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 Gm27397-201ENSMUST00000184997 107 ntBASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 AA619741-201ENSMUST00000195095 646 ntBASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Tnfrsf1aP25118 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf1aP25118 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf1aP25118 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf1aP25118 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf1aP25118 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf1aP25118 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.69□□□□□ -0.54
Tnfrsf1aP25118 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf1aP25118 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Tnfrsf1aP25118 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Tnfrsf1aP25118 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Tnfrsf1aP25118 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf1aP25118 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf1aP25118 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Tnfrsf1aP25118 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Tnfrsf1aP25118 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.69□□□□□ -0.54
Tnfrsf1aP25118 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf1aP25118 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Tnfrsf1aP25118 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf1aP25118 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC11.69□□□□□ -0.54
Tnfrsf1aP25118 Gm25925-201ENSMUST00000158314 306 ntBASIC11.69□□□□□ -0.54
Tnfrsf1aP25118 AA543401-201ENSMUST00000164248 1269 ntBASIC11.69□□□□□ -0.54
Tnfrsf1aP25118 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC11.69□□□□□ -0.54
Tnfrsf1aP25118 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC11.69□□□□□ -0.54
Tnfrsf1aP25118 Gm24513-201ENSMUST00000174964 138 ntBASIC11.69□□□□□ -0.54
Tnfrsf1aP25118 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Tnfrsf1aP25118 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf1aP25118 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf1aP25118 Gm44608-201ENSMUST00000206827 855 ntBASIC11.69□□□□□ -0.54
Tnfrsf1aP25118 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Tnfrsf1aP25118 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf1aP25118 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms