Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cbx3P23198 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Cbx3P23198 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cbx3P23198 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cbx3P23198 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cbx3P23198 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cbx3P23198 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Cbx3P23198 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cbx3P23198 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cbx3P23198 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cbx3P23198 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cbx3P23198 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.71□□□□□ -0.37
Cbx3P23198 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cbx3P23198 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cbx3P23198 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cbx3P23198 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cbx3P23198 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cbx3P23198 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.71□□□□□ -0.37
Cbx3P23198 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cbx3P23198 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cbx3P23198 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cbx3P23198 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cbx3P23198 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.71□□□□□ -0.37
Cbx3P23198 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.71□□□□□ -0.37
Cbx3P23198 Gm15165-201ENSMUST00000118140 502 ntBASIC12.71□□□□□ -0.37
Cbx3P23198 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cbx3P23198 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.71□□□□□ -0.37
Cbx3P23198 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cbx3P23198 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cbx3P23198 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cbx3P23198 Gm19164-201ENSMUST00000210667 640 ntBASIC12.71□□□□□ -0.37
Cbx3P23198 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cbx3P23198 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Cbx3P23198 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cbx3P23198 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cbx3P23198 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cbx3P23198 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cbx3P23198 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cbx3P23198 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cbx3P23198 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cbx3P23198 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cbx3P23198 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cbx3P23198 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cbx3P23198 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cbx3P23198 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cbx3P23198 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cbx3P23198 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cbx3P23198 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cbx3P23198 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.7□□□□□ -0.38
Cbx3P23198 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cbx3P23198 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cbx3P23198 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.7□□□□□ -0.38
Cbx3P23198 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.7□□□□□ -0.38
Cbx3P23198 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.7□□□□□ -0.38
Cbx3P23198 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.7□□□□□ -0.38
Cbx3P23198 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.7□□□□□ -0.38
Cbx3P23198 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.7□□□□□ -0.38
Cbx3P23198 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cbx3P23198 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cbx3P23198 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cbx3P23198 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cbx3P23198 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cbx3P23198 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Cbx3P23198 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cbx3P23198 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cbx3P23198 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cbx3P23198 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cbx3P23198 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cbx3P23198 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cbx3P23198 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cbx3P23198 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cbx3P23198 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cbx3P23198 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cbx3P23198 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cbx3P23198 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.69□□□□□ -0.38
Cbx3P23198 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cbx3P23198 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cbx3P23198 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cbx3P23198 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cbx3P23198 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cbx3P23198 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Cbx3P23198 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.69□□□□□ -0.38
Cbx3P23198 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cbx3P23198 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cbx3P23198 Celf4-206ENSMUST00000224553 1729 ntBASIC12.69□□□□□ -0.38
Cbx3P23198 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cbx3P23198 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cbx3P23198 Gm8344-201ENSMUST00000119813 856 ntBASIC12.69□□□□□ -0.38
Cbx3P23198 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cbx3P23198 Gm27704-201ENSMUST00000185094 107 ntBASIC12.69□□□□□ -0.38
Cbx3P23198 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cbx3P23198 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cbx3P23198 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cbx3P23198 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cbx3P23198 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cbx3P23198 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cbx3P23198 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cbx3P23198 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cbx3P23198 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cbx3P23198 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms