Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf9P20334 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf9P20334 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf9P20334 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf9P20334 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf9P20334 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf9P20334 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf9P20334 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Tnfrsf9P20334 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf9P20334 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf9P20334 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf9P20334 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf9P20334 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf9P20334 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf9P20334 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC11.51□□□□□ -0.57
Tnfrsf9P20334 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf9P20334 Gm8602-201ENSMUST00000184045 607 ntBASIC11.51□□□□□ -0.57
Tnfrsf9P20334 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.51□□□□□ -0.57
Tnfrsf9P20334 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf9P20334 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf9P20334 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf9P20334 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf9P20334 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf9P20334 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf9P20334 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf9P20334 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf9P20334 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf9P20334 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf9P20334 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf9P20334 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf9P20334 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf9P20334 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf9P20334 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf9P20334 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf9P20334 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf9P20334 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf9P20334 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Tnfrsf9P20334 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf9P20334 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf9P20334 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf9P20334 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf9P20334 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf9P20334 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf9P20334 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf9P20334 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf9P20334 Gm12091-201ENSMUST00000146791 830 ntBASIC11.5□□□□□ -0.57
Tnfrsf9P20334 Gm27680-201ENSMUST00000184192 160 ntBASIC11.5□□□□□ -0.57
Tnfrsf9P20334 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.5□□□□□ -0.57
Tnfrsf9P20334 Gm29667-201ENSMUST00000190817 490 ntBASIC11.5□□□□□ -0.57
Tnfrsf9P20334 Gm8597-201ENSMUST00000191525 1109 ntBASIC11.5□□□□□ -0.57
Tnfrsf9P20334 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf9P20334 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf9P20334 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.5□□□□□ -0.57
Tnfrsf9P20334 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf9P20334 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf9P20334 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf9P20334 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf9P20334 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf9P20334 Gm37057-201ENSMUST00000192624 1916 ntBASIC11.5□□□□□ -0.57
Tnfrsf9P20334 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Tnfrsf9P20334 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf9P20334 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf9P20334 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf9P20334 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf9P20334 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf9P20334 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf9P20334 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf9P20334 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Mir7085-201ENSMUST00000184353 66 ntBASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Gm8515-201ENSMUST00000194852 576 ntBASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Gm9908-201ENSMUST00000211534 448 ntBASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Gm37728-201ENSMUST00000195025 2292 ntBASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms