Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc8P09025 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc8P09025 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Hoxc8P09025 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc8P09025 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc8P09025 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.74□□□□□ -0.05
Hoxc8P09025 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.74□□□□□ -0.05
Hoxc8P09025 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.74□□□□□ -0.05
Hoxc8P09025 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.74□□□□□ -0.05
Hoxc8P09025 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc8P09025 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc8P09025 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.74□□□□□ -0.05
Hoxc8P09025 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc8P09025 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc8P09025 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc8P09025 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc8P09025 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Hoxc8P09025 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc8P09025 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.74□□□□□ -0.05
Hoxc8P09025 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc8P09025 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc8P09025 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.74□□□□□ -0.05
Hoxc8P09025 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.74□□□□□ -0.05
Hoxc8P09025 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc8P09025 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc8P09025 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc8P09025 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc8P09025 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc8P09025 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc8P09025 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc8P09025 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc8P09025 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.73□□□□□ -0.05
Hoxc8P09025 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Hoxc8P09025 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.73□□□□□ -0.05
Hoxc8P09025 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc8P09025 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.73□□□□□ -0.05
Hoxc8P09025 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.73□□□□□ -0.05
Hoxc8P09025 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc8P09025 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc8P09025 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc8P09025 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc8P09025 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.73□□□□□ -0.05
Hoxc8P09025 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.73□□□□□ -0.05
Hoxc8P09025 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.73□□□□□ -0.05
Hoxc8P09025 Gm38002-201ENSMUST00000193255 180 ntBASIC14.73□□□□□ -0.05
Hoxc8P09025 Gm37922-201ENSMUST00000195596 455 ntBASIC14.73□□□□□ -0.05
Hoxc8P09025 Gm43118-201ENSMUST00000199149 775 ntBASIC14.73□□□□□ -0.05
Hoxc8P09025 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.73□□□□□ -0.05
Hoxc8P09025 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Hoxc8P09025 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc8P09025 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.73□□□□□ -0.05
Hoxc8P09025 Gm9257-201ENSMUST00000221254 232 ntBASIC14.73□□□□□ -0.05
Hoxc8P09025 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc8P09025 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc8P09025 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc8P09025 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc8P09025 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc8P09025 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc8P09025 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Hoxc8P09025 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.73□□□□□ -0.05
Hoxc8P09025 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Hoxc8P09025 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc8P09025 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc8P09025 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Hoxc8P09025 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc8P09025 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc8P09025 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc8P09025 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc8P09025 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc8P09025 Gm12134-201ENSMUST00000122109 520 ntBASIC14.72□□□□□ -0.05
Hoxc8P09025 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.72□□□□□ -0.05
Hoxc8P09025 Gm7029-201ENSMUST00000173226 450 ntBASIC14.72□□□□□ -0.05
Hoxc8P09025 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.72□□□□□ -0.05
Hoxc8P09025 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc8P09025 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.72□□□□□ -0.05
Hoxc8P09025 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc8P09025 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.72□□□□□ -0.05
Hoxc8P09025 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc8P09025 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc8P09025 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.72□□□□□ -0.05
Hoxc8P09025 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Hoxc8P09025 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc8P09025 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.72□□□□□ -0.05
Hoxc8P09025 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc8P09025 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.72□□□□□ -0.05
Hoxc8P09025 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc8P09025 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc8P09025 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc8P09025 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc8P09025 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc8P09025 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc8P09025 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc8P09025 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc8P09025 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Hoxc8P09025 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc8P09025 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc8P09025 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc8P09025 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Hoxc8P09025 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.71□□□□□ -0.05
Hoxc8P09025 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms