Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col4a1P02463 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col4a1P02463 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col4a1P02463 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col4a1P02463 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.87■□□□□ 0.29
Col4a1P02463 Gm26513-201ENSMUST00000181802 2489 ntBASIC16.87■□□□□ 0.29
Col4a1P02463 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col4a1P02463 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a1P02463 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a1P02463 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.86■□□□□ 0.29
Col4a1P02463 Gm3756-201ENSMUST00000169182 1355 ntBASIC16.86■□□□□ 0.29
Col4a1P02463 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a1P02463 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a1P02463 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Col4a1P02463 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Col4a1P02463 Gm9431-201ENSMUST00000119765 1051 ntBASIC16.86■□□□□ 0.29
Col4a1P02463 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC16.86■□□□□ 0.29
Col4a1P02463 Gm7895-201ENSMUST00000187459 1173 ntBASIC16.86■□□□□ 0.29
Col4a1P02463 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC16.86■□□□□ 0.29
Col4a1P02463 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC16.86■□□□□ 0.29
Col4a1P02463 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a1P02463 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a1P02463 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a1P02463 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a1P02463 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a1P02463 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a1P02463 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Col4a1P02463 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Col4a1P02463 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a1P02463 Gm12363-201ENSMUST00000122250 668 ntBASIC16.85■□□□□ 0.29
Col4a1P02463 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Col4a1P02463 Gm10268-201ENSMUST00000085340 555 ntBASIC16.85■□□□□ 0.29
Col4a1P02463 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a1P02463 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Col4a1P02463 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a1P02463 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a1P02463 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a1P02463 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a1P02463 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a1P02463 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a1P02463 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a1P02463 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a1P02463 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a1P02463 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a1P02463 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a1P02463 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a1P02463 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Col4a1P02463 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a1P02463 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC16.85■□□□□ 0.29
Col4a1P02463 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC16.85■□□□□ 0.29
Col4a1P02463 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a1P02463 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col4a1P02463 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a1P02463 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Col4a1P02463 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a1P02463 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a1P02463 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a1P02463 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a1P02463 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a1P02463 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC16.84■□□□□ 0.29
Col4a1P02463 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a1P02463 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a1P02463 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a1P02463 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a1P02463 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a1P02463 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a1P02463 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a1P02463 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a1P02463 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC16.84■□□□□ 0.29
Col4a1P02463 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a1P02463 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a1P02463 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a1P02463 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Col4a1P02463 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC16.84■□□□□ 0.29
Col4a1P02463 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a1P02463 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Col4a1P02463 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a1P02463 Gm5896-201ENSMUST00000189662 1024 ntBASIC16.84■□□□□ 0.29
Col4a1P02463 Ighv1-62-201ENSMUST00000193406 350 ntBASIC16.84■□□□□ 0.29
Col4a1P02463 Gm44985-201ENSMUST00000206202 1016 ntBASIC16.84■□□□□ 0.29
Col4a1P02463 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC16.84■□□□□ 0.29
Col4a1P02463 AC154171.1-201ENSMUST00000224610 643 ntBASIC16.84■□□□□ 0.29
Col4a1P02463 Gm2824-203ENSMUST00000226189 1228 ntBASIC16.84■□□□□ 0.29
Col4a1P02463 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a1P02463 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Col4a1P02463 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a1P02463 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a1P02463 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a1P02463 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col4a1P02463 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col4a1P02463 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Col4a1P02463 Gm12846-201ENSMUST00000120431 1373 ntBASIC16.83■□□□□ 0.29
Col4a1P02463 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col4a1P02463 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col4a1P02463 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col4a1P02463 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
Col4a1P02463 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col4a1P02463 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col4a1P02463 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col4a1P02463 AC153366.2-201ENSMUST00000219461 1984 ntBASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms