Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.26□□□□□ -0.45
NgfP01139 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NgfP01139 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
NgfP01139 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NgfP01139 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NgfP01139 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.26□□□□□ -0.45
NgfP01139 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NgfP01139 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NgfP01139 Gm12384-201ENSMUST00000119228 919 ntBASIC12.26□□□□□ -0.45
NgfP01139 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.26□□□□□ -0.45
NgfP01139 Gm11803-201ENSMUST00000119966 444 ntBASIC12.26□□□□□ -0.45
NgfP01139 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.26□□□□□ -0.45
NgfP01139 Gm8062-201ENSMUST00000139696 444 ntBASIC12.26□□□□□ -0.45
NgfP01139 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NgfP01139 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
NgfP01139 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.26□□□□□ -0.45
NgfP01139 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
NgfP01139 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NgfP01139 Gm2445-201ENSMUST00000182798 989 ntBASIC12.26□□□□□ -0.45
NgfP01139 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NgfP01139 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.26□□□□□ -0.45
NgfP01139 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
NgfP01139 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.26□□□□□ -0.45
NgfP01139 Gm8598-201ENSMUST00000221184 836 ntBASIC12.26□□□□□ -0.45
NgfP01139 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.26□□□□□ -0.45
NgfP01139 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NgfP01139 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NgfP01139 Gm10478-201ENSMUST00000084451 396 ntBASIC12.26□□□□□ -0.45
NgfP01139 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
NgfP01139 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
NgfP01139 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NgfP01139 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NgfP01139 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NgfP01139 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NgfP01139 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NgfP01139 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
NgfP01139 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NgfP01139 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NgfP01139 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
NgfP01139 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
NgfP01139 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NgfP01139 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NgfP01139 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NgfP01139 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
NgfP01139 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
NgfP01139 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
NgfP01139 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NgfP01139 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
NgfP01139 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NgfP01139 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
NgfP01139 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
NgfP01139 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NgfP01139 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
NgfP01139 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.25□□□□□ -0.45
NgfP01139 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NgfP01139 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NgfP01139 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
NgfP01139 Gm8213-201ENSMUST00000118191 441 ntBASIC12.25□□□□□ -0.45
NgfP01139 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.25□□□□□ -0.45
NgfP01139 Gm17420-201ENSMUST00000164753 153 ntBASIC12.25□□□□□ -0.45
NgfP01139 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NgfP01139 Gm38144-201ENSMUST00000192790 465 ntBASIC12.25□□□□□ -0.45
NgfP01139 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.25□□□□□ -0.45
NgfP01139 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
NgfP01139 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.25□□□□□ -0.45
NgfP01139 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.25□□□□□ -0.45
NgfP01139 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.25□□□□□ -0.45
NgfP01139 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NgfP01139 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
NgfP01139 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NgfP01139 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NgfP01139 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.25□□□□□ -0.45
NgfP01139 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
NgfP01139 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
NgfP01139 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.25□□□□□ -0.45
NgfP01139 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NgfP01139 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NgfP01139 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.25□□□□□ -0.45
NgfP01139 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NgfP01139 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
NgfP01139 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NgfP01139 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NgfP01139 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
NgfP01139 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
NgfP01139 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
NgfP01139 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
NgfP01139 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NgfP01139 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.24□□□□□ -0.45
NgfP01139 Gm10156-201ENSMUST00000122364 462 ntBASIC12.24□□□□□ -0.45
NgfP01139 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.24□□□□□ -0.45
NgfP01139 Gm22331-201ENSMUST00000158066 136 ntBASIC12.24□□□□□ -0.45
NgfP01139 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
NgfP01139 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NgfP01139 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
NgfP01139 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.24□□□□□ -0.45
NgfP01139 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.24□□□□□ -0.45
NgfP01139 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NgfP01139 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.24□□□□□ -0.45
NgfP01139 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NgfP01139 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms