Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a20bO88575 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a20bO88575 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Slc6a20bO88575 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a20bO88575 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a20bO88575 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Slc6a20bO88575 Gm22323-201ENSMUST00000103832 109 ntBASIC15.15■□□□□ 0.02
Slc6a20bO88575 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC15.15■□□□□ 0.02
Slc6a20bO88575 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a20bO88575 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a20bO88575 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a20bO88575 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC15.15■□□□□ 0.02
Slc6a20bO88575 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a20bO88575 Gm7895-201ENSMUST00000187459 1173 ntBASIC15.15■□□□□ 0.02
Slc6a20bO88575 Gm4971-201ENSMUST00000205991 1108 ntBASIC15.15■□□□□ 0.02
Slc6a20bO88575 Mettl6-204ENSMUST00000227595 1027 ntBASIC15.15■□□□□ 0.02
Slc6a20bO88575 Itm2b-204ENSMUST00000228637 783 ntBASIC15.15■□□□□ 0.02
Slc6a20bO88575 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a20bO88575 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a20bO88575 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a20bO88575 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Slc6a20bO88575 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a20bO88575 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a20bO88575 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a20bO88575 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a20bO88575 AC168058.1-201ENSMUST00000219521 2282 ntBASIC15.15■□□□□ 0.02
Slc6a20bO88575 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a20bO88575 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a20bO88575 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a20bO88575 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a20bO88575 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a20bO88575 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a20bO88575 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.15■□□□□ 0.02
Slc6a20bO88575 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a20bO88575 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a20bO88575 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Slc6a20bO88575 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.14■□□□□ 0.01
Slc6a20bO88575 Gm13730-201ENSMUST00000121036 1462 ntBASIC15.14■□□□□ 0.01
Slc6a20bO88575 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC15.14■□□□□ 0.01
Slc6a20bO88575 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a20bO88575 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a20bO88575 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a20bO88575 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a20bO88575 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC15.14■□□□□ 0.01
Slc6a20bO88575 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a20bO88575 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC15.14■□□□□ 0.01
Slc6a20bO88575 Gm25261-201ENSMUST00000157416 134 ntBASIC15.14■□□□□ 0.01
Slc6a20bO88575 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC15.14■□□□□ 0.01
Slc6a20bO88575 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a20bO88575 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC15.14■□□□□ 0.01
Slc6a20bO88575 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a20bO88575 CT573034.1-201ENSMUST00000222983 313 ntBASIC15.14■□□□□ 0.01
Slc6a20bO88575 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a20bO88575 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC15.14■□□□□ 0.01
Slc6a20bO88575 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Slc6a20bO88575 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a20bO88575 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Slc6a20bO88575 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a20bO88575 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a20bO88575 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a20bO88575 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a20bO88575 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a20bO88575 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Slc6a20bO88575 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a20bO88575 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a20bO88575 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a20bO88575 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a20bO88575 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a20bO88575 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Slc6a20bO88575 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC15.14■□□□□ 0.01
Slc6a20bO88575 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a20bO88575 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a20bO88575 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a20bO88575 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a20bO88575 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a20bO88575 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a20bO88575 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Slc6a20bO88575 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a20bO88575 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a20bO88575 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.13■□□□□ 0.01
Slc6a20bO88575 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a20bO88575 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a20bO88575 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a20bO88575 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a20bO88575 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a20bO88575 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a20bO88575 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a20bO88575 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a20bO88575 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC15.13■□□□□ 0.01
Slc6a20bO88575 Gm12241-201ENSMUST00000118330 726 ntBASIC15.13■□□□□ 0.01
Slc6a20bO88575 Gm13369-201ENSMUST00000119442 987 ntBASIC15.13■□□□□ 0.01
Slc6a20bO88575 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC15.13■□□□□ 0.01
Slc6a20bO88575 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Slc6a20bO88575 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a20bO88575 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.13■□□□□ 0.01
Slc6a20bO88575 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.13■□□□□ 0.01
Slc6a20bO88575 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC15.13■□□□□ 0.01
Slc6a20bO88575 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a20bO88575 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Slc6a20bO88575 Mir433-201ENSMUST00000093564 124 ntBASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms