Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cops6O88545 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Cops6O88545 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cops6O88545 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.97■□□□□ 0.31
Cops6O88545 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cops6O88545 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC16.97■□□□□ 0.31
Cops6O88545 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cops6O88545 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cops6O88545 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cops6O88545 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cops6O88545 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cops6O88545 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.97■□□□□ 0.31
Cops6O88545 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cops6O88545 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cops6O88545 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cops6O88545 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cops6O88545 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cops6O88545 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cops6O88545 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC16.97■□□□□ 0.31
Cops6O88545 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC16.97■□□□□ 0.31
Cops6O88545 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cops6O88545 Gm13226-201ENSMUST00000117838 404 ntBASIC16.97■□□□□ 0.31
Cops6O88545 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC16.97■□□□□ 0.31
Cops6O88545 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cops6O88545 Gm38671-201ENSMUST00000200573 130 ntBASIC16.97■□□□□ 0.31
Cops6O88545 Gm42550-201ENSMUST00000201553 960 ntBASIC16.97■□□□□ 0.31
Cops6O88545 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC16.97■□□□□ 0.31
Cops6O88545 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Cops6O88545 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cops6O88545 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cops6O88545 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.97■□□□□ 0.31
Cops6O88545 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cops6O88545 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cops6O88545 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cops6O88545 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cops6O88545 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cops6O88545 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cops6O88545 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cops6O88545 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cops6O88545 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC16.96■□□□□ 0.31
Cops6O88545 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cops6O88545 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.96■□□□□ 0.31
Cops6O88545 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cops6O88545 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Cops6O88545 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.96■□□□□ 0.31
Cops6O88545 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cops6O88545 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cops6O88545 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Cops6O88545 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cops6O88545 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cops6O88545 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC16.96■□□□□ 0.31
Cops6O88545 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cops6O88545 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.96■□□□□ 0.31
Cops6O88545 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC16.96■□□□□ 0.31
Cops6O88545 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cops6O88545 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cops6O88545 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cops6O88545 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cops6O88545 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cops6O88545 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cops6O88545 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cops6O88545 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cops6O88545 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cops6O88545 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cops6O88545 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cops6O88545 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cops6O88545 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cops6O88545 Mmp14-206ENSMUST00000225641 3238 ntBASIC16.96■□□□□ 0.31
Cops6O88545 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cops6O88545 Zkscan14-203ENSMUST00000198959 2243 ntBASIC16.96■□□□□ 0.3
Cops6O88545 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.3
Cops6O88545 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC16.96■□□□□ 0.3
Cops6O88545 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cops6O88545 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Cops6O88545 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC16.96■□□□□ 0.3
Cops6O88545 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Cops6O88545 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cops6O88545 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cops6O88545 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cops6O88545 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cops6O88545 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cops6O88545 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Cops6O88545 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cops6O88545 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cops6O88545 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Cops6O88545 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Cops6O88545 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cops6O88545 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cops6O88545 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Cops6O88545 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cops6O88545 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cops6O88545 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC16.95■□□□□ 0.3
Cops6O88545 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC16.95■□□□□ 0.3
Cops6O88545 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cops6O88545 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cops6O88545 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cops6O88545 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cops6O88545 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cops6O88545 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cops6O88545 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms