Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col5a1O88207 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col5a1O88207 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col5a1O88207 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col5a1O88207 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.41□□□□□ -0.42
Col5a1O88207 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col5a1O88207 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col5a1O88207 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col5a1O88207 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col5a1O88207 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.41□□□□□ -0.42
Col5a1O88207 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.41□□□□□ -0.42
Col5a1O88207 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.41□□□□□ -0.42
Col5a1O88207 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.41□□□□□ -0.42
Col5a1O88207 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.41□□□□□ -0.42
Col5a1O88207 Gm12403-201ENSMUST00000121384 959 ntBASIC12.41□□□□□ -0.42
Col5a1O88207 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col5a1O88207 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col5a1O88207 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col5a1O88207 Gm22334-201ENSMUST00000158070 133 ntBASIC12.41□□□□□ -0.42
Col5a1O88207 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.41□□□□□ -0.42
Col5a1O88207 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.41□□□□□ -0.42
Col5a1O88207 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.41□□□□□ -0.42
Col5a1O88207 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.41□□□□□ -0.42
Col5a1O88207 Gm38158-201ENSMUST00000194617 339 ntBASIC12.41□□□□□ -0.42
Col5a1O88207 Gm6082-201ENSMUST00000215204 454 ntBASIC12.41□□□□□ -0.42
Col5a1O88207 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col5a1O88207 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col5a1O88207 Gm5161-201ENSMUST00000075243 853 ntBASIC12.41□□□□□ -0.42
Col5a1O88207 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col5a1O88207 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col5a1O88207 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col5a1O88207 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Col5a1O88207 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col5a1O88207 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col5a1O88207 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.4□□□□□ -0.42
Col5a1O88207 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col5a1O88207 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.4□□□□□ -0.42
Col5a1O88207 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col5a1O88207 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col5a1O88207 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col5a1O88207 Mir698-201ENSMUST00000102164 109 ntBASIC12.4□□□□□ -0.42
Col5a1O88207 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col5a1O88207 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col5a1O88207 Gm13461-201ENSMUST00000120980 662 ntBASIC12.4□□□□□ -0.42
Col5a1O88207 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.4□□□□□ -0.42
Col5a1O88207 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.4□□□□□ -0.42
Col5a1O88207 Gm27320-201ENSMUST00000184892 109 ntBASIC12.4□□□□□ -0.42
Col5a1O88207 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col5a1O88207 Gm42627-201ENSMUST00000197347 224 ntBASIC12.4□□□□□ -0.42
Col5a1O88207 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.4□□□□□ -0.42
Col5a1O88207 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col5a1O88207 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col5a1O88207 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col5a1O88207 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col5a1O88207 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col5a1O88207 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Col5a1O88207 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col5a1O88207 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col5a1O88207 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col5a1O88207 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col5a1O88207 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col5a1O88207 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Col5a1O88207 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col5a1O88207 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col5a1O88207 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Col5a1O88207 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Col5a1O88207 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Col5a1O88207 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Col5a1O88207 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col5a1O88207 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col5a1O88207 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col5a1O88207 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.39□□□□□ -0.43
Col5a1O88207 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col5a1O88207 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col5a1O88207 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col5a1O88207 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col5a1O88207 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col5a1O88207 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col5a1O88207 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.39□□□□□ -0.43
Col5a1O88207 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.39□□□□□ -0.43
Col5a1O88207 Gm9954-202ENSMUST00000198686 4725 ntBASIC12.39□□□□□ -0.43
Col5a1O88207 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col5a1O88207 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col5a1O88207 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col5a1O88207 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col5a1O88207 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Col5a1O88207 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col5a1O88207 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col5a1O88207 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC12.39□□□□□ -0.43
Col5a1O88207 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.39□□□□□ -0.43
Col5a1O88207 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col5a1O88207 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Col5a1O88207 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col5a1O88207 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col5a1O88207 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.39□□□□□ -0.43
Col5a1O88207 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col5a1O88207 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Col5a1O88207 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col5a1O88207 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col5a1O88207 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms