Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarce1O54941 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Smarce1O54941 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Smarce1O54941 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarce1O54941 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smarce1O54941 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC16.59■□□□□ 0.25
Smarce1O54941 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smarce1O54941 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarce1O54941 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarce1O54941 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Smarce1O54941 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Smarce1O54941 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smarce1O54941 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.59■□□□□ 0.25
Smarce1O54941 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smarce1O54941 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarce1O54941 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarce1O54941 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarce1O54941 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarce1O54941 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarce1O54941 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarce1O54941 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarce1O54941 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarce1O54941 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarce1O54941 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarce1O54941 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC16.59■□□□□ 0.25
Smarce1O54941 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Smarce1O54941 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarce1O54941 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.59■□□□□ 0.25
Smarce1O54941 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarce1O54941 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Smarce1O54941 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC16.59■□□□□ 0.25
Smarce1O54941 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarce1O54941 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Smarce1O54941 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Smarce1O54941 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smarce1O54941 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smarce1O54941 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smarce1O54941 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smarce1O54941 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Smarce1O54941 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Smarce1O54941 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smarce1O54941 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Smarce1O54941 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Smarce1O54941 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Smarce1O54941 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Smarce1O54941 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Smarce1O54941 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarce1O54941 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Smarce1O54941 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarce1O54941 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarce1O54941 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarce1O54941 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Smarce1O54941 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Smarce1O54941 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.58■□□□□ 0.24
Smarce1O54941 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarce1O54941 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.58■□□□□ 0.24
Smarce1O54941 Gm18206-201ENSMUST00000207027 926 ntBASIC16.58■□□□□ 0.24
Smarce1O54941 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.58■□□□□ 0.24
Smarce1O54941 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Smarce1O54941 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarce1O54941 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarce1O54941 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Smarce1O54941 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarce1O54941 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarce1O54941 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC16.58■□□□□ 0.24
Smarce1O54941 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarce1O54941 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarce1O54941 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Smarce1O54941 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Smarce1O54941 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smarce1O54941 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Smarce1O54941 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarce1O54941 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Smarce1O54941 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarce1O54941 Acot6-202ENSMUST00000222921 3622 ntBASIC16.57■□□□□ 0.24
Smarce1O54941 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarce1O54941 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarce1O54941 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smarce1O54941 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarce1O54941 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarce1O54941 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Smarce1O54941 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarce1O54941 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16.57■□□□□ 0.24
Smarce1O54941 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.57■□□□□ 0.24
Smarce1O54941 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarce1O54941 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarce1O54941 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarce1O54941 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Smarce1O54941 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarce1O54941 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Smarce1O54941 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarce1O54941 Gm15467-201ENSMUST00000120582 445 ntBASIC16.57■□□□□ 0.24
Smarce1O54941 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.57■□□□□ 0.24
Smarce1O54941 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smarce1O54941 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smarce1O54941 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
Smarce1O54941 Gm8116-201ENSMUST00000182917 1201 ntBASIC16.57■□□□□ 0.24
Smarce1O54941 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.57■□□□□ 0.24
Smarce1O54941 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smarce1O54941 AC154595.3-201ENSMUST00000224579 384 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms