Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc4O35988 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc4O35988 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Sdc4O35988 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc4O35988 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc4O35988 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.37□□□□□ -0.11
Sdc4O35988 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc4O35988 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc4O35988 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc4O35988 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sdc4O35988 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.37□□□□□ -0.11
Sdc4O35988 Gm11478-201ENSMUST00000117851 599 ntBASIC14.37□□□□□ -0.11
Sdc4O35988 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc4O35988 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.37□□□□□ -0.11
Sdc4O35988 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.37□□□□□ -0.11
Sdc4O35988 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc4O35988 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sdc4O35988 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc4O35988 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.37□□□□□ -0.11
Sdc4O35988 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc4O35988 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc4O35988 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Sdc4O35988 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Sdc4O35988 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc4O35988 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Sdc4O35988 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc4O35988 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.37□□□□□ -0.11
Sdc4O35988 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc4O35988 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Sdc4O35988 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc4O35988 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc4O35988 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc4O35988 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc4O35988 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc4O35988 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc4O35988 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc4O35988 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc4O35988 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc4O35988 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc4O35988 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc4O35988 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc4O35988 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc4O35988 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc4O35988 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc4O35988 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.36□□□□□ -0.11
Sdc4O35988 Gm12341-201ENSMUST00000119724 503 ntBASIC14.36□□□□□ -0.11
Sdc4O35988 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.36□□□□□ -0.11
Sdc4O35988 Gm11918-201ENSMUST00000121660 179 ntBASIC14.36□□□□□ -0.11
Sdc4O35988 Gm8927-201ENSMUST00000181978 981 ntBASIC14.36□□□□□ -0.11
Sdc4O35988 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc4O35988 Gm45384-201ENSMUST00000210451 277 ntBASIC14.36□□□□□ -0.11
Sdc4O35988 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc4O35988 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.36□□□□□ -0.11
Sdc4O35988 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Sdc4O35988 Gm3222-201ENSMUST00000071282 990 ntBASIC14.36□□□□□ -0.11
Sdc4O35988 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc4O35988 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.36□□□□□ -0.11
Sdc4O35988 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc4O35988 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc4O35988 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc4O35988 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Sdc4O35988 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Sdc4O35988 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc4O35988 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc4O35988 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc4O35988 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc4O35988 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc4O35988 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc4O35988 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sdc4O35988 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sdc4O35988 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sdc4O35988 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.35□□□□□ -0.11
Sdc4O35988 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sdc4O35988 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Sdc4O35988 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Sdc4O35988 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sdc4O35988 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Sdc4O35988 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sdc4O35988 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sdc4O35988 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Sdc4O35988 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Sdc4O35988 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sdc4O35988 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sdc4O35988 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.35□□□□□ -0.11
Sdc4O35988 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.35□□□□□ -0.11
Sdc4O35988 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sdc4O35988 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sdc4O35988 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sdc4O35988 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sdc4O35988 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Sdc4O35988 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sdc4O35988 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sdc4O35988 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc4O35988 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc4O35988 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Sdc4O35988 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc4O35988 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc4O35988 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.34□□□□□ -0.11
Sdc4O35988 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sdc4O35988 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms