Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sptlc1O35704 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Sptlc1O35704 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sptlc1O35704 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sptlc1O35704 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sptlc1O35704 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sptlc1O35704 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Sptlc1O35704 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Sptlc1O35704 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sptlc1O35704 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC15.39■□□□□ 0.05
Sptlc1O35704 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Sptlc1O35704 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sptlc1O35704 Gm38037-201ENSMUST00000192600 1624 ntBASIC15.39■□□□□ 0.05
Sptlc1O35704 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sptlc1O35704 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sptlc1O35704 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sptlc1O35704 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sptlc1O35704 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Sptlc1O35704 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Sptlc1O35704 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sptlc1O35704 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sptlc1O35704 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sptlc1O35704 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Sptlc1O35704 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sptlc1O35704 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sptlc1O35704 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Sptlc1O35704 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sptlc1O35704 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sptlc1O35704 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Sptlc1O35704 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Sptlc1O35704 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Sptlc1O35704 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sptlc1O35704 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.38■□□□□ 0.05
Sptlc1O35704 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Sptlc1O35704 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sptlc1O35704 Gm6649-201ENSMUST00000199743 1165 ntBASIC15.38■□□□□ 0.05
Sptlc1O35704 Gm45610-201ENSMUST00000209227 784 ntBASIC15.38■□□□□ 0.05
Sptlc1O35704 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Sptlc1O35704 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sptlc1O35704 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Sptlc1O35704 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC15.38■□□□□ 0.05
Sptlc1O35704 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sptlc1O35704 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sptlc1O35704 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Sptlc1O35704 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sptlc1O35704 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC15.38■□□□□ 0.05
Sptlc1O35704 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sptlc1O35704 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sptlc1O35704 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sptlc1O35704 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Sptlc1O35704 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sptlc1O35704 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sptlc1O35704 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Sptlc1O35704 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sptlc1O35704 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Sptlc1O35704 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sptlc1O35704 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sptlc1O35704 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sptlc1O35704 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sptlc1O35704 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC15.37■□□□□ 0.05
Sptlc1O35704 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sptlc1O35704 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC15.37■□□□□ 0.05
Sptlc1O35704 Gm18062-201ENSMUST00000208020 547 ntBASIC15.37■□□□□ 0.05
Sptlc1O35704 Gm18055-201ENSMUST00000208254 547 ntBASIC15.37■□□□□ 0.05
Sptlc1O35704 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC15.37■□□□□ 0.05
Sptlc1O35704 Gm9520-201ENSMUST00000209460 1253 ntBASIC15.37■□□□□ 0.05
Sptlc1O35704 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC15.37■□□□□ 0.05
Sptlc1O35704 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sptlc1O35704 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC15.37■□□□□ 0.05
Sptlc1O35704 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sptlc1O35704 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sptlc1O35704 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sptlc1O35704 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sptlc1O35704 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sptlc1O35704 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sptlc1O35704 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sptlc1O35704 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sptlc1O35704 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Sptlc1O35704 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sptlc1O35704 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sptlc1O35704 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.37■□□□□ 0.05
Sptlc1O35704 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sptlc1O35704 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Sptlc1O35704 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sptlc1O35704 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sptlc1O35704 Gm5912-201ENSMUST00000122282 1438 ntBASIC15.36■□□□□ 0.05
Sptlc1O35704 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sptlc1O35704 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sptlc1O35704 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sptlc1O35704 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sptlc1O35704 Gm42471-201ENSMUST00000201457 1865 ntBASIC15.36■□□□□ 0.05
Sptlc1O35704 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sptlc1O35704 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.36■□□□□ 0.05
Sptlc1O35704 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sptlc1O35704 Gm13385-201ENSMUST00000121089 220 ntBASIC15.36■□□□□ 0.05
Sptlc1O35704 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sptlc1O35704 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Sptlc1O35704 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.36■□□□□ 0.05
Sptlc1O35704 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sptlc1O35704 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms