Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Gm6916-202ENSMUST00000205523 195 ntBASIC13.65□□□□□ -0.22
Npc1O35604 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.65□□□□□ -0.22
Npc1O35604 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.65□□□□□ -0.22
Npc1O35604 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Npc1O35604 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Npc1O35604 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Npc1O35604 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.65□□□□□ -0.22
Npc1O35604 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Npc1O35604 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Npc1O35604 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Npc1O35604 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Npc1O35604 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Npc1O35604 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Npc1O35604 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Npc1O35604 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Npc1O35604 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Npc1O35604 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Npc1O35604 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Npc1O35604 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Npc1O35604 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Npc1O35604 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Npc1O35604 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Npc1O35604 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Npc1O35604 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Npc1O35604 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Npc1O35604 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Npc1O35604 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Npc1O35604 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Npc1O35604 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Npc1O35604 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Npc1O35604 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Npc1O35604 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
Npc1O35604 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Npc1O35604 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Npc1O35604 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.64□□□□□ -0.23
Npc1O35604 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Npc1O35604 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Npc1O35604 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Npc1O35604 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.64□□□□□ -0.23
Npc1O35604 Gm7730-201ENSMUST00000212486 454 ntBASIC13.64□□□□□ -0.23
Npc1O35604 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Npc1O35604 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Npc1O35604 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Npc1O35604 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.64□□□□□ -0.23
Npc1O35604 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Npc1O35604 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Npc1O35604 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Npc1O35604 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Npc1O35604 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Npc1O35604 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Npc1O35604 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Npc1O35604 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Npc1O35604 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Npc1O35604 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Npc1O35604 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Npc1O35604 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npc1O35604 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Npc1O35604 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Npc1O35604 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npc1O35604 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Npc1O35604 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npc1O35604 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npc1O35604 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Npc1O35604 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.63□□□□□ -0.23
Npc1O35604 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npc1O35604 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Npc1O35604 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npc1O35604 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npc1O35604 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npc1O35604 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npc1O35604 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npc1O35604 Gm15460-201ENSMUST00000118147 391 ntBASIC13.63□□□□□ -0.23
Npc1O35604 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Npc1O35604 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.63□□□□□ -0.23
Npc1O35604 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.63□□□□□ -0.23
Npc1O35604 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Npc1O35604 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.63□□□□□ -0.23
Npc1O35604 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.63□□□□□ -0.23
Npc1O35604 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.63□□□□□ -0.23
Npc1O35604 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.63□□□□□ -0.23
Npc1O35604 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Npc1O35604 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npc1O35604 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npc1O35604 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Npc1O35604 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Npc1O35604 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Npc1O35604 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npc1O35604 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.63□□□□□ -0.23
Npc1O35604 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npc1O35604 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Npc1O35604 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Npc1O35604 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Npc1O35604 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Npc1O35604 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npc1O35604 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npc1O35604 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npc1O35604 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Npc1O35604 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npc1O35604 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Npc1O35604 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms