Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Spr-ps1-201ENSMUST00000089584 605 ntBASIC11.81□□□□□ -0.52
Prrt1O35449 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Prrt1O35449 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Prrt1O35449 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Prrt1O35449 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Prrt1O35449 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Prrt1O35449 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Prrt1O35449 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Prrt1O35449 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Prrt1O35449 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Prrt1O35449 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.81□□□□□ -0.52
Prrt1O35449 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Prrt1O35449 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Prrt1O35449 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Prrt1O35449 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC11.8□□□□□ -0.52
Prrt1O35449 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Prrt1O35449 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Prrt1O35449 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Prrt1O35449 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Prrt1O35449 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Prrt1O35449 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Prrt1O35449 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC11.8□□□□□ -0.52
Prrt1O35449 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Prrt1O35449 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Prrt1O35449 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Prrt1O35449 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Prrt1O35449 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Prrt1O35449 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Prrt1O35449 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Prrt1O35449 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Prrt1O35449 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Prrt1O35449 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Prrt1O35449 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Prrt1O35449 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Prrt1O35449 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Prrt1O35449 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Prrt1O35449 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Prrt1O35449 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Prrt1O35449 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Prrt1O35449 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.8□□□□□ -0.52
Prrt1O35449 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Prrt1O35449 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Prrt1O35449 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Prrt1O35449 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Prrt1O35449 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.8□□□□□ -0.52
Prrt1O35449 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Prrt1O35449 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.8□□□□□ -0.52
Prrt1O35449 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Prrt1O35449 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Prrt1O35449 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Prrt1O35449 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.79□□□□□ -0.52
Prrt1O35449 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Prrt1O35449 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Prrt1O35449 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Prrt1O35449 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Prrt1O35449 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Prrt1O35449 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Prrt1O35449 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Prrt1O35449 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Prrt1O35449 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Prrt1O35449 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Prrt1O35449 Gm6659-201ENSMUST00000174752 547 ntBASIC11.79□□□□□ -0.52
Prrt1O35449 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC11.79□□□□□ -0.52
Prrt1O35449 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.79□□□□□ -0.52
Prrt1O35449 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Prrt1O35449 Gm2272-201ENSMUST00000194903 582 ntBASIC11.79□□□□□ -0.52
Prrt1O35449 Gm43935-201ENSMUST00000203569 1050 ntBASIC11.79□□□□□ -0.52
Prrt1O35449 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC11.79□□□□□ -0.52
Prrt1O35449 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Prrt1O35449 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Prrt1O35449 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Prrt1O35449 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Prrt1O35449 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Prrt1O35449 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Prrt1O35449 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Prrt1O35449 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Prrt1O35449 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.79□□□□□ -0.52
Prrt1O35449 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Prrt1O35449 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Prrt1O35449 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Prrt1O35449 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Prrt1O35449 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Prrt1O35449 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Prrt1O35449 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Prrt1O35449 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Prrt1O35449 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Prrt1O35449 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Prrt1O35449 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Prrt1O35449 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Prrt1O35449 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prrt1O35449 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prrt1O35449 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Prrt1O35449 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Prrt1O35449 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prrt1O35449 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prrt1O35449 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prrt1O35449 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prrt1O35449 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prrt1O35449 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prrt1O35449 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms