Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Polr1aO35134 Gm24548-201ENSMUST00000158650 108 ntBASIC21.1■□□□□ 0.97
Polr1aO35134 Gm21769-201ENSMUST00000211922 111 ntBASIC21.1■□□□□ 0.97
Polr1aO35134 Gm5781-201ENSMUST00000219792 443 ntBASIC21.1■□□□□ 0.97
Polr1aO35134 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC21.1■□□□□ 0.97
Polr1aO35134 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Polr1aO35134 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Polr1aO35134 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Polr1aO35134 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Polr1aO35134 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Polr1aO35134 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Polr1aO35134 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Polr1aO35134 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Polr1aO35134 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Polr1aO35134 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Polr1aO35134 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Polr1aO35134 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC21.09■□□□□ 0.97
Polr1aO35134 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC21.09■□□□□ 0.97
Polr1aO35134 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC21.09■□□□□ 0.97
Polr1aO35134 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Polr1aO35134 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC21.09■□□□□ 0.97
Polr1aO35134 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Polr1aO35134 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Polr1aO35134 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Polr1aO35134 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Polr1aO35134 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Polr1aO35134 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Polr1aO35134 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Polr1aO35134 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Polr1aO35134 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Polr1aO35134 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Polr1aO35134 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Polr1aO35134 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Polr1aO35134 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Polr1aO35134 Gm15808-201ENSMUST00000119046 604 ntBASIC21.09■□□□□ 0.97
Polr1aO35134 Gm29199-201ENSMUST00000187766 775 ntBASIC21.09■□□□□ 0.97
Polr1aO35134 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC21.09■□□□□ 0.97
Polr1aO35134 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Polr1aO35134 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Polr1aO35134 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC21.09■□□□□ 0.97
Polr1aO35134 AC139350.1-201ENSMUST00000227064 1594 ntBASIC21.09■□□□□ 0.97
Polr1aO35134 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Polr1aO35134 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Polr1aO35134 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Polr1aO35134 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Polr1aO35134 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Polr1aO35134 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Polr1aO35134 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Polr1aO35134 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC21.08■□□□□ 0.97
Polr1aO35134 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC21.08■□□□□ 0.97
Polr1aO35134 Gm8227-201ENSMUST00000223306 571 ntBASIC21.08■□□□□ 0.97
Polr1aO35134 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Polr1aO35134 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Polr1aO35134 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Polr1aO35134 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Polr1aO35134 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Polr1aO35134 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Polr1aO35134 Gm9768-201ENSMUST00000206007 2861 ntBASIC21.08■□□□□ 0.96
Polr1aO35134 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Polr1aO35134 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Polr1aO35134 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Polr1aO35134 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Polr1aO35134 Gm43579-201ENSMUST00000202387 1307 ntBASIC21.07■□□□□ 0.96
Polr1aO35134 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Polr1aO35134 Gm4986-201ENSMUST00000119731 549 ntBASIC21.07■□□□□ 0.96
Polr1aO35134 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Polr1aO35134 AC134335.2-201ENSMUST00000227660 440 ntBASIC21.07■□□□□ 0.96
Polr1aO35134 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Polr1aO35134 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Polr1aO35134 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Polr1aO35134 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Polr1aO35134 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Polr1aO35134 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Polr1aO35134 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Polr1aO35134 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Polr1aO35134 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Polr1aO35134 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Polr1aO35134 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC21.07■□□□□ 0.96
Polr1aO35134 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Polr1aO35134 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Polr1aO35134 Mir3102-201ENSMUST00000175555 104 ntBASIC21.07■□□□□ 0.96
Polr1aO35134 Gm37042-201ENSMUST00000193816 581 ntBASIC21.07■□□□□ 0.96
Polr1aO35134 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC21.07■□□□□ 0.96
Polr1aO35134 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Polr1aO35134 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Polr1aO35134 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Polr1aO35134 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Polr1aO35134 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
Polr1aO35134 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Polr1aO35134 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Polr1aO35134 Gm7993-201ENSMUST00000200970 1384 ntBASIC21.06■□□□□ 0.96
Polr1aO35134 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Polr1aO35134 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Polr1aO35134 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Polr1aO35134 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Polr1aO35134 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Polr1aO35134 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Polr1aO35134 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
Polr1aO35134 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Polr1aO35134 Gm11964-201ENSMUST00000120982 444 ntBASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms