Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf3O08791 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf3O08791 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf3O08791 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf3O08791 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf3O08791 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.53□□□□□ -0.08
Ebf3O08791 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf3O08791 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf3O08791 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf3O08791 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf3O08791 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ebf3O08791 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ebf3O08791 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ebf3O08791 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ebf3O08791 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
Ebf3O08791 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ebf3O08791 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Ebf3O08791 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ebf3O08791 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ebf3O08791 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ebf3O08791 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ebf3O08791 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ebf3O08791 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.52□□□□□ -0.09
Ebf3O08791 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ebf3O08791 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ebf3O08791 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ebf3O08791 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ebf3O08791 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Ebf3O08791 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ebf3O08791 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ebf3O08791 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ebf3O08791 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ebf3O08791 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ebf3O08791 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ebf3O08791 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ebf3O08791 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ebf3O08791 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf3O08791 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf3O08791 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf3O08791 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf3O08791 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.51□□□□□ -0.09
Ebf3O08791 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf3O08791 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Ebf3O08791 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.51□□□□□ -0.09
Ebf3O08791 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.51□□□□□ -0.09
Ebf3O08791 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf3O08791 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf3O08791 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf3O08791 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.51□□□□□ -0.09
Ebf3O08791 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.51□□□□□ -0.09
Ebf3O08791 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.51□□□□□ -0.09
Ebf3O08791 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf3O08791 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf3O08791 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf3O08791 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf3O08791 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf3O08791 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ebf3O08791 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.51□□□□□ -0.09
Ebf3O08791 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ebf3O08791 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.51□□□□□ -0.09
Ebf3O08791 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf3O08791 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf3O08791 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf3O08791 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf3O08791 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf3O08791 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf3O08791 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf3O08791 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf3O08791 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Ebf3O08791 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf3O08791 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf3O08791 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf3O08791 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.5□□□□□ -0.09
Ebf3O08791 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Ebf3O08791 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf3O08791 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf3O08791 Gm13829-201ENSMUST00000119600 138 ntBASIC14.5□□□□□ -0.09
Ebf3O08791 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf3O08791 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.5□□□□□ -0.09
Ebf3O08791 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.5□□□□□ -0.09
Ebf3O08791 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf3O08791 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf3O08791 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf3O08791 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf3O08791 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf3O08791 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf3O08791 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf3O08791 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.5□□□□□ -0.09
Ebf3O08791 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf3O08791 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf3O08791 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf3O08791 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf3O08791 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf3O08791 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf3O08791 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf3O08791 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf3O08791 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.5□□□□□ -0.09
Ebf3O08791 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Ebf3O08791 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.5□□□□□ -0.09
Ebf3O08791 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms