Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Dctn1O08788 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Dctn1O08788 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Dctn1O08788 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC17.17■□□□□ 0.34
Dctn1O08788 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Dctn1O08788 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Dctn1O08788 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Dctn1O08788 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Dctn1O08788 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Dctn1O08788 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC17.16■□□□□ 0.34
Dctn1O08788 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Dctn1O08788 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Dctn1O08788 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Dctn1O08788 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Dctn1O08788 Gm13612-201ENSMUST00000119276 390 ntBASIC17.16■□□□□ 0.34
Dctn1O08788 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC17.16■□□□□ 0.34
Dctn1O08788 Gm17420-201ENSMUST00000164753 153 ntBASIC17.16■□□□□ 0.34
Dctn1O08788 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Dctn1O08788 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Dctn1O08788 Gm9728-201ENSMUST00000200197 1055 ntBASIC17.16■□□□□ 0.34
Dctn1O08788 Gm4971-201ENSMUST00000205991 1108 ntBASIC17.16■□□□□ 0.34
Dctn1O08788 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Dctn1O08788 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Dctn1O08788 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Dctn1O08788 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Dctn1O08788 Gm9347-201ENSMUST00000211473 1607 ntBASIC17.16■□□□□ 0.34
Dctn1O08788 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Dctn1O08788 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Dctn1O08788 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Dctn1O08788 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC17.16■□□□□ 0.34
Dctn1O08788 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Dctn1O08788 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Dctn1O08788 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Dctn1O08788 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Dctn1O08788 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Dctn1O08788 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Dctn1O08788 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dctn1O08788 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Dctn1O08788 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Dctn1O08788 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Dctn1O08788 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dctn1O08788 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dctn1O08788 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Dctn1O08788 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC17.15■□□□□ 0.34
Dctn1O08788 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dctn1O08788 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Dctn1O08788 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dctn1O08788 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC17.15■□□□□ 0.34
Dctn1O08788 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC17.15■□□□□ 0.34
Dctn1O08788 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Dctn1O08788 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Dctn1O08788 Gm42442-201ENSMUST00000197951 1133 ntBASIC17.15■□□□□ 0.34
Dctn1O08788 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC17.15■□□□□ 0.34
Dctn1O08788 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dctn1O08788 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dctn1O08788 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dctn1O08788 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Dctn1O08788 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Dctn1O08788 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dctn1O08788 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dctn1O08788 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dctn1O08788 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Dctn1O08788 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dctn1O08788 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dctn1O08788 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Dctn1O08788 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dctn1O08788 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Dctn1O08788 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Dctn1O08788 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Dctn1O08788 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Dctn1O08788 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dctn1O08788 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Dctn1O08788 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dctn1O08788 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dctn1O08788 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Dctn1O08788 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dctn1O08788 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC17.14■□□□□ 0.33
Dctn1O08788 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dctn1O08788 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dctn1O08788 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dctn1O08788 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Dctn1O08788 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dctn1O08788 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Dctn1O08788 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC17.14■□□□□ 0.33
Dctn1O08788 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Dctn1O08788 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Dctn1O08788 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Dctn1O08788 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC17.14■□□□□ 0.33
Dctn1O08788 CT030704.2-201ENSMUST00000228887 494 ntBASIC17.14■□□□□ 0.33
Dctn1O08788 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dctn1O08788 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Dctn1O08788 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Dctn1O08788 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Dctn1O08788 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dctn1O08788 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Dctn1O08788 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dctn1O08788 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dctn1O08788 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Dctn1O08788 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dctn1O08788 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms