Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Trim55G3X8Y1 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trim55G3X8Y1 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trim55G3X8Y1 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim55G3X8Y1 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.33□□□□□ -0.12
Trim55G3X8Y1 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim55G3X8Y1 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim55G3X8Y1 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim55G3X8Y1 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim55G3X8Y1 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.33□□□□□ -0.12
Trim55G3X8Y1 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.33□□□□□ -0.12
Trim55G3X8Y1 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.33□□□□□ -0.12
Trim55G3X8Y1 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim55G3X8Y1 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim55G3X8Y1 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trim55G3X8Y1 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim55G3X8Y1 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim55G3X8Y1 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trim55G3X8Y1 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim55G3X8Y1 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trim55G3X8Y1 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim55G3X8Y1 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.32□□□□□ -0.12
Trim55G3X8Y1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim55G3X8Y1 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim55G3X8Y1 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trim55G3X8Y1 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim55G3X8Y1 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim55G3X8Y1 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim55G3X8Y1 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.32□□□□□ -0.12
Trim55G3X8Y1 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.32□□□□□ -0.12
Trim55G3X8Y1 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.32□□□□□ -0.12
Trim55G3X8Y1 Gm43767-201ENSMUST00000198933 381 ntBASIC14.32□□□□□ -0.12
Trim55G3X8Y1 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim55G3X8Y1 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim55G3X8Y1 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.32□□□□□ -0.12
Trim55G3X8Y1 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim55G3X8Y1 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim55G3X8Y1 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim55G3X8Y1 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim55G3X8Y1 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim55G3X8Y1 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim55G3X8Y1 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim55G3X8Y1 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim55G3X8Y1 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim55G3X8Y1 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim55G3X8Y1 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim55G3X8Y1 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.31□□□□□ -0.12
Trim55G3X8Y1 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trim55G3X8Y1 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim55G3X8Y1 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim55G3X8Y1 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim55G3X8Y1 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim55G3X8Y1 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim55G3X8Y1 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim55G3X8Y1 Gm11950-201ENSMUST00000121615 838 ntBASIC14.31□□□□□ -0.12
Trim55G3X8Y1 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim55G3X8Y1 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim55G3X8Y1 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim55G3X8Y1 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim55G3X8Y1 Gm28033-201ENSMUST00000184224 96 ntBASIC14.31□□□□□ -0.12
Trim55G3X8Y1 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim55G3X8Y1 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trim55G3X8Y1 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim55G3X8Y1 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim55G3X8Y1 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim55G3X8Y1 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim55G3X8Y1 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim55G3X8Y1 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim55G3X8Y1 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim55G3X8Y1 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim55G3X8Y1 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim55G3X8Y1 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trim55G3X8Y1 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim55G3X8Y1 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trim55G3X8Y1 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim55G3X8Y1 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim55G3X8Y1 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 Gm8318-201ENSMUST00000182954 872 ntBASIC14.3□□□□□ -0.12
Trim55G3X8Y1 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms