Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NpcdF8VQB8 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NpcdF8VQB8 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NpcdF8VQB8 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.75■□□□□ 0.27
NpcdF8VQB8 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NpcdF8VQB8 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
NpcdF8VQB8 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NpcdF8VQB8 Gm10339-203ENSMUST00000225409 1671 ntBASIC16.75■□□□□ 0.27
NpcdF8VQB8 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NpcdF8VQB8 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NpcdF8VQB8 Ankra2-208ENSMUST00000226100 1476 ntBASIC16.74■□□□□ 0.27
NpcdF8VQB8 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NpcdF8VQB8 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NpcdF8VQB8 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC16.74■□□□□ 0.27
NpcdF8VQB8 Gm22018-201ENSMUST00000104357 131 ntBASIC16.74■□□□□ 0.27
NpcdF8VQB8 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NpcdF8VQB8 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NpcdF8VQB8 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NpcdF8VQB8 Gm27331-201ENSMUST00000183705 60 ntBASIC16.74■□□□□ 0.27
NpcdF8VQB8 Gm27772-201ENSMUST00000184900 187 ntBASIC16.74■□□□□ 0.27
NpcdF8VQB8 Gm38223-201ENSMUST00000194484 695 ntBASIC16.74■□□□□ 0.27
NpcdF8VQB8 Gm38341-201ENSMUST00000195357 515 ntBASIC16.74■□□□□ 0.27
NpcdF8VQB8 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NpcdF8VQB8 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NpcdF8VQB8 AC134335.2-201ENSMUST00000227660 440 ntBASIC16.74■□□□□ 0.27
NpcdF8VQB8 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NpcdF8VQB8 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NpcdF8VQB8 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NpcdF8VQB8 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.74■□□□□ 0.27
NpcdF8VQB8 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.74■□□□□ 0.27
NpcdF8VQB8 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
NpcdF8VQB8 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NpcdF8VQB8 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NpcdF8VQB8 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NpcdF8VQB8 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NpcdF8VQB8 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NpcdF8VQB8 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NpcdF8VQB8 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NpcdF8VQB8 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NpcdF8VQB8 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NpcdF8VQB8 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NpcdF8VQB8 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NpcdF8VQB8 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NpcdF8VQB8 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NpcdF8VQB8 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
NpcdF8VQB8 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NpcdF8VQB8 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NpcdF8VQB8 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.73■□□□□ 0.27
NpcdF8VQB8 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NpcdF8VQB8 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NpcdF8VQB8 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NpcdF8VQB8 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC16.73■□□□□ 0.27
NpcdF8VQB8 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC16.73■□□□□ 0.27
NpcdF8VQB8 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC16.73■□□□□ 0.27
NpcdF8VQB8 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
NpcdF8VQB8 Gm37008-201ENSMUST00000195712 319 ntBASIC16.73■□□□□ 0.27
NpcdF8VQB8 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NpcdF8VQB8 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
NpcdF8VQB8 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NpcdF8VQB8 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NpcdF8VQB8 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NpcdF8VQB8 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
NpcdF8VQB8 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC16.73■□□□□ 0.27
NpcdF8VQB8 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
NpcdF8VQB8 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NpcdF8VQB8 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NpcdF8VQB8 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NpcdF8VQB8 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC16.72■□□□□ 0.27
NpcdF8VQB8 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NpcdF8VQB8 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.72■□□□□ 0.27
NpcdF8VQB8 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NpcdF8VQB8 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NpcdF8VQB8 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NpcdF8VQB8 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NpcdF8VQB8 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
NpcdF8VQB8 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NpcdF8VQB8 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NpcdF8VQB8 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.72■□□□□ 0.27
NpcdF8VQB8 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NpcdF8VQB8 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
NpcdF8VQB8 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NpcdF8VQB8 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NpcdF8VQB8 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
NpcdF8VQB8 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NpcdF8VQB8 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.72■□□□□ 0.27
NpcdF8VQB8 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NpcdF8VQB8 Gm38000-201ENSMUST00000192390 1215 ntBASIC16.72■□□□□ 0.27
NpcdF8VQB8 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.72■□□□□ 0.27
NpcdF8VQB8 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.72■□□□□ 0.27
NpcdF8VQB8 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC16.72■□□□□ 0.27
NpcdF8VQB8 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC16.72■□□□□ 0.27
NpcdF8VQB8 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC16.72■□□□□ 0.27
NpcdF8VQB8 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC16.72■□□□□ 0.27
NpcdF8VQB8 CT573034.1-201ENSMUST00000222983 313 ntBASIC16.72■□□□□ 0.27
NpcdF8VQB8 Mir433-201ENSMUST00000093564 124 ntBASIC16.72■□□□□ 0.27
NpcdF8VQB8 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
NpcdF8VQB8 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NpcdF8VQB8 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NpcdF8VQB8 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.72■□□□□ 0.27
NpcdF8VQB8 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms