Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh1F7BJK1 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Gm15957-201ENSMUST00000118893 974 ntBASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Gm2445-201ENSMUST00000182798 989 ntBASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh1F7BJK1 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Gm18206-201ENSMUST00000207027 926 ntBASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Gm5364-201ENSMUST00000216789 889 ntBASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms