Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atf6F6VAN0 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atf6F6VAN0 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atf6F6VAN0 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Atf6F6VAN0 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atf6F6VAN0 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atf6F6VAN0 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atf6F6VAN0 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.37□□□□□ -0.11
Atf6F6VAN0 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.37□□□□□ -0.11
Atf6F6VAN0 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Atf6F6VAN0 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atf6F6VAN0 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atf6F6VAN0 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atf6F6VAN0 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atf6F6VAN0 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atf6F6VAN0 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atf6F6VAN0 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atf6F6VAN0 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atf6F6VAN0 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atf6F6VAN0 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atf6F6VAN0 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atf6F6VAN0 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atf6F6VAN0 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atf6F6VAN0 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Atf6F6VAN0 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atf6F6VAN0 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.36□□□□□ -0.11
Atf6F6VAN0 Gm15693-201ENSMUST00000120470 637 ntBASIC14.36□□□□□ -0.11
Atf6F6VAN0 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Atf6F6VAN0 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.36□□□□□ -0.11
Atf6F6VAN0 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.36□□□□□ -0.11
Atf6F6VAN0 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atf6F6VAN0 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atf6F6VAN0 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atf6F6VAN0 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Atf6F6VAN0 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atf6F6VAN0 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atf6F6VAN0 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Atf6F6VAN0 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atf6F6VAN0 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Atf6F6VAN0 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Atf6F6VAN0 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atf6F6VAN0 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atf6F6VAN0 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.36□□□□□ -0.11
Atf6F6VAN0 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Atf6F6VAN0 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atf6F6VAN0 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Atf6F6VAN0 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atf6F6VAN0 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Atf6F6VAN0 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.35□□□□□ -0.11
Atf6F6VAN0 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atf6F6VAN0 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Atf6F6VAN0 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atf6F6VAN0 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Atf6F6VAN0 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atf6F6VAN0 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atf6F6VAN0 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Atf6F6VAN0 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Atf6F6VAN0 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atf6F6VAN0 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atf6F6VAN0 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Atf6F6VAN0 Mir1897-201ENSMUST00000122581 272 ntBASIC14.35□□□□□ -0.11
Atf6F6VAN0 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Atf6F6VAN0 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.35□□□□□ -0.11
Atf6F6VAN0 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.35□□□□□ -0.11
Atf6F6VAN0 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Atf6F6VAN0 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.35□□□□□ -0.11
Atf6F6VAN0 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.35□□□□□ -0.11
Atf6F6VAN0 Gm6916-202ENSMUST00000205523 195 ntBASIC14.35□□□□□ -0.11
Atf6F6VAN0 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.35□□□□□ -0.11
Atf6F6VAN0 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.35□□□□□ -0.11
Atf6F6VAN0 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atf6F6VAN0 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atf6F6VAN0 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atf6F6VAN0 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Atf6F6VAN0 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atf6F6VAN0 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Atf6F6VAN0 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atf6F6VAN0 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atf6F6VAN0 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atf6F6VAN0 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atf6F6VAN0 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atf6F6VAN0 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atf6F6VAN0 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atf6F6VAN0 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atf6F6VAN0 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atf6F6VAN0 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atf6F6VAN0 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atf6F6VAN0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
Atf6F6VAN0 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atf6F6VAN0 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Atf6F6VAN0 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Atf6F6VAN0 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atf6F6VAN0 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.34□□□□□ -0.11
Atf6F6VAN0 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.34□□□□□ -0.11
Atf6F6VAN0 Gm12428-201ENSMUST00000119844 727 ntBASIC14.34□□□□□ -0.11
Atf6F6VAN0 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.34□□□□□ -0.11
Atf6F6VAN0 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atf6F6VAN0 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC14.34□□□□□ -0.11
Atf6F6VAN0 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.34□□□□□ -0.11
Atf6F6VAN0 Gm18027-201ENSMUST00000218947 619 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms