Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Gm14028-201ENSMUST00000117434 479 ntBASIC19.16■□□□□ 0.66
Scaf11E9PZM7 Gm11222-201ENSMUST00000119005 738 ntBASIC19.16■□□□□ 0.66
Scaf11E9PZM7 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC19.16■□□□□ 0.66
Scaf11E9PZM7 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC19.16■□□□□ 0.66
Scaf11E9PZM7 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scaf11E9PZM7 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scaf11E9PZM7 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scaf11E9PZM7 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Scaf11E9PZM7 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scaf11E9PZM7 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Scaf11E9PZM7 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC19.16■□□□□ 0.66
Scaf11E9PZM7 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Scaf11E9PZM7 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Scaf11E9PZM7 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scaf11E9PZM7 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Scaf11E9PZM7 Gm43509-201ENSMUST00000196551 2594 ntBASIC19.16■□□□□ 0.66
Scaf11E9PZM7 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Scaf11E9PZM7 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scaf11E9PZM7 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Scaf11E9PZM7 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Scaf11E9PZM7 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC19.16■□□□□ 0.66
Scaf11E9PZM7 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Scaf11E9PZM7 Gm29741-201ENSMUST00000192667 421 ntBASIC19.16■□□□□ 0.66
Scaf11E9PZM7 Gm42997-202ENSMUST00000200321 985 ntBASIC19.16■□□□□ 0.66
Scaf11E9PZM7 Gm44064-201ENSMUST00000204964 1087 ntBASIC19.16■□□□□ 0.66
Scaf11E9PZM7 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC19.16■□□□□ 0.66
Scaf11E9PZM7 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scaf11E9PZM7 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scaf11E9PZM7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.15■□□□□ 0.66
Scaf11E9PZM7 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf11E9PZM7 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf11E9PZM7 Gm10040-201ENSMUST00000080726 1662 ntBASIC19.15■□□□□ 0.66
Scaf11E9PZM7 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf11E9PZM7 Gm43598-201ENSMUST00000202482 2479 ntBASIC19.15■□□□□ 0.66
Scaf11E9PZM7 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf11E9PZM7 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf11E9PZM7 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf11E9PZM7 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf11E9PZM7 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf11E9PZM7 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Scaf11E9PZM7 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf11E9PZM7 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf11E9PZM7 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf11E9PZM7 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf11E9PZM7 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf11E9PZM7 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Scaf11E9PZM7 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf11E9PZM7 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC19.15■□□□□ 0.66
Scaf11E9PZM7 Gm7857-201ENSMUST00000117957 358 ntBASIC19.15■□□□□ 0.66
Scaf11E9PZM7 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf11E9PZM7 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf11E9PZM7 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC19.15■□□□□ 0.66
Scaf11E9PZM7 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC19.15■□□□□ 0.66
Scaf11E9PZM7 CT030704.2-201ENSMUST00000228887 494 ntBASIC19.15■□□□□ 0.66
Scaf11E9PZM7 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Scaf11E9PZM7 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf11E9PZM7 Ssr1-204ENSMUST00000225319 1610 ntBASIC19.15■□□□□ 0.66
Scaf11E9PZM7 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf11E9PZM7 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf11E9PZM7 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Scaf11E9PZM7 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.66
Scaf11E9PZM7 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Scaf11E9PZM7 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scaf11E9PZM7 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scaf11E9PZM7 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC19.14■□□□□ 0.65
Scaf11E9PZM7 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
Scaf11E9PZM7 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Scaf11E9PZM7 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scaf11E9PZM7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Scaf11E9PZM7 Mir698-201ENSMUST00000102164 109 ntBASIC19.14■□□□□ 0.65
Scaf11E9PZM7 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC19.14■□□□□ 0.65
Scaf11E9PZM7 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Scaf11E9PZM7 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC19.14■□□□□ 0.65
Scaf11E9PZM7 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC19.14■□□□□ 0.65
Scaf11E9PZM7 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scaf11E9PZM7 CT025533.2-201ENSMUST00000228715 1248 ntBASIC19.14■□□□□ 0.65
Scaf11E9PZM7 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Scaf11E9PZM7 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scaf11E9PZM7 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scaf11E9PZM7 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scaf11E9PZM7 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scaf11E9PZM7 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scaf11E9PZM7 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Scaf11E9PZM7 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scaf11E9PZM7 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scaf11E9PZM7 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scaf11E9PZM7 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Scaf11E9PZM7 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scaf11E9PZM7 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scaf11E9PZM7 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scaf11E9PZM7 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Scaf11E9PZM7 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Scaf11E9PZM7 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scaf11E9PZM7 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scaf11E9PZM7 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scaf11E9PZM7 Gm25732-201ENSMUST00000175168 60 ntBASIC19.13■□□□□ 0.65
Scaf11E9PZM7 Gm5869-201ENSMUST00000200248 1257 ntBASIC19.13■□□□□ 0.65
Scaf11E9PZM7 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scaf11E9PZM7 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Scaf11E9PZM7 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms