Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh17E9PXF0 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.02□□□□□ -0.32
Pcdh17E9PXF0 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh17E9PXF0 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh17E9PXF0 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh17E9PXF0 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh17E9PXF0 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh17E9PXF0 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Pcdh17E9PXF0 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Gm9908-201ENSMUST00000211534 448 ntBASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdh17E9PXF0 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh17E9PXF0 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pcdh17E9PXF0 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh17E9PXF0 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh17E9PXF0 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh17E9PXF0 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh17E9PXF0 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh17E9PXF0 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh17E9PXF0 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh17E9PXF0 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.01□□□□□ -0.33
Pcdh17E9PXF0 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh17E9PXF0 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh17E9PXF0 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh17E9PXF0 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.01□□□□□ -0.33
Pcdh17E9PXF0 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh17E9PXF0 Gm12138-201ENSMUST00000122180 951 ntBASIC13.01□□□□□ -0.33
Pcdh17E9PXF0 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.01□□□□□ -0.33
Pcdh17E9PXF0 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Pcdh17E9PXF0 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdh17E9PXF0 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.01□□□□□ -0.33
Pcdh17E9PXF0 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh17E9PXF0 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdh17E9PXF0 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh17E9PXF0 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh17E9PXF0 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.01□□□□□ -0.33
Pcdh17E9PXF0 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh17E9PXF0 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh17E9PXF0 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pcdh17E9PXF0 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh17E9PXF0 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh17E9PXF0 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh17E9PXF0 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.01□□□□□ -0.33
Pcdh17E9PXF0 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh17E9PXF0 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh17E9PXF0 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdh17E9PXF0 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdh17E9PXF0 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh17E9PXF0 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh17E9PXF0 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh17E9PXF0 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh17E9PXF0 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13□□□□□ -0.33
Pcdh17E9PXF0 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13□□□□□ -0.33
Pcdh17E9PXF0 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh17E9PXF0 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Pcdh17E9PXF0 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh17E9PXF0 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdh17E9PXF0 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdh17E9PXF0 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdh17E9PXF0 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh17E9PXF0 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh17E9PXF0 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pcdh17E9PXF0 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pcdh17E9PXF0 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pcdh17E9PXF0 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms