Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Gm27920-201ENSMUST00000183953 96 ntBASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim30cD3YVI9 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Gm2810-201ENSMUST00000118681 990 ntBASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim30cD3YVI9 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim30cD3YVI9 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim30cD3YVI9 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim30cD3YVI9 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim30cD3YVI9 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.28■□□□□ 0.04
Trim30cD3YVI9 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trim30cD3YVI9 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim30cD3YVI9 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim30cD3YVI9 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim30cD3YVI9 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Trim30cD3YVI9 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Trim30cD3YVI9 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Trim30cD3YVI9 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.28■□□□□ 0.04
Trim30cD3YVI9 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.28■□□□□ 0.04
Trim30cD3YVI9 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.28■□□□□ 0.04
Trim30cD3YVI9 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trim30cD3YVI9 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim30cD3YVI9 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim30cD3YVI9 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim30cD3YVI9 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.28■□□□□ 0.04
Trim30cD3YVI9 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC15.28■□□□□ 0.04
Trim30cD3YVI9 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim30cD3YVI9 Gm37660-201ENSMUST00000192754 1732 ntBASIC15.28■□□□□ 0.04
Trim30cD3YVI9 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim30cD3YVI9 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim30cD3YVI9 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms