Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a6B1AVK5 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.09□□□□□ -0.15
Col4a6B1AVK5 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a6B1AVK5 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a6B1AVK5 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a6B1AVK5 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Col4a6B1AVK5 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a6B1AVK5 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.09□□□□□ -0.15
Col4a6B1AVK5 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a6B1AVK5 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a6B1AVK5 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a6B1AVK5 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a6B1AVK5 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a6B1AVK5 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a6B1AVK5 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a6B1AVK5 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col4a6B1AVK5 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a6B1AVK5 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a6B1AVK5 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a6B1AVK5 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Col4a6B1AVK5 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a6B1AVK5 Gm11964-201ENSMUST00000120982 444 ntBASIC14.08□□□□□ -0.16
Col4a6B1AVK5 Gm14381-201ENSMUST00000122105 414 ntBASIC14.08□□□□□ -0.16
Col4a6B1AVK5 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a6B1AVK5 Gm24548-201ENSMUST00000158650 108 ntBASIC14.08□□□□□ -0.16
Col4a6B1AVK5 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a6B1AVK5 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.08□□□□□ -0.16
Col4a6B1AVK5 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.08□□□□□ -0.16
Col4a6B1AVK5 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Col4a6B1AVK5 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.08□□□□□ -0.16
Col4a6B1AVK5 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a6B1AVK5 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a6B1AVK5 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a6B1AVK5 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a6B1AVK5 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a6B1AVK5 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a6B1AVK5 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a6B1AVK5 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a6B1AVK5 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a6B1AVK5 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Col4a6B1AVK5 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a6B1AVK5 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a6B1AVK5 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a6B1AVK5 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a6B1AVK5 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a6B1AVK5 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.08□□□□□ -0.16
Col4a6B1AVK5 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Col4a6B1AVK5 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a6B1AVK5 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Col4a6B1AVK5 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a6B1AVK5 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.07□□□□□ -0.16
Col4a6B1AVK5 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a6B1AVK5 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Col4a6B1AVK5 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC14.07□□□□□ -0.16
Col4a6B1AVK5 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.07□□□□□ -0.16
Col4a6B1AVK5 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC14.07□□□□□ -0.16
Col4a6B1AVK5 Gm20482-202ENSMUST00000174729 825 ntBASIC14.07□□□□□ -0.16
Col4a6B1AVK5 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a6B1AVK5 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a6B1AVK5 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Col4a6B1AVK5 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a6B1AVK5 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a6B1AVK5 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a6B1AVK5 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a6B1AVK5 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a6B1AVK5 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a6B1AVK5 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a6B1AVK5 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a6B1AVK5 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a6B1AVK5 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a6B1AVK5 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a6B1AVK5 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a6B1AVK5 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a6B1AVK5 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a6B1AVK5 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a6B1AVK5 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a6B1AVK5 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a6B1AVK5 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a6B1AVK5 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a6B1AVK5 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a6B1AVK5 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a6B1AVK5 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a6B1AVK5 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a6B1AVK5 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.06□□□□□ -0.16
Col4a6B1AVK5 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a6B1AVK5 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a6B1AVK5 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a6B1AVK5 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a6B1AVK5 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a6B1AVK5 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a6B1AVK5 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.06□□□□□ -0.16
Col4a6B1AVK5 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Col4a6B1AVK5 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a6B1AVK5 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Col4a6B1AVK5 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Col4a6B1AVK5 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a6B1AVK5 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a6B1AVK5 Gm2383-201ENSMUST00000181461 807 ntBASIC14.06□□□□□ -0.16
Col4a6B1AVK5 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC14.06□□□□□ -0.16
Col4a6B1AVK5 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms