Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.65□□□□□ -0.22
Chd3B1AR17 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.65□□□□□ -0.22
Chd3B1AR17 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.65□□□□□ -0.22
Chd3B1AR17 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd3B1AR17 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd3B1AR17 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Chd3B1AR17 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chd3B1AR17 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chd3B1AR17 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd3B1AR17 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chd3B1AR17 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd3B1AR17 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Chd3B1AR17 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.65□□□□□ -0.22
Chd3B1AR17 Gm11478-201ENSMUST00000117851 599 ntBASIC13.65□□□□□ -0.22
Chd3B1AR17 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.65□□□□□ -0.22
Chd3B1AR17 Gm8584-201ENSMUST00000171982 758 ntBASIC13.65□□□□□ -0.22
Chd3B1AR17 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Chd3B1AR17 Gm8927-201ENSMUST00000181978 981 ntBASIC13.65□□□□□ -0.22
Chd3B1AR17 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Chd3B1AR17 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd3B1AR17 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.65□□□□□ -0.22
Chd3B1AR17 Gm3222-201ENSMUST00000071282 990 ntBASIC13.65□□□□□ -0.22
Chd3B1AR17 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Chd3B1AR17 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd3B1AR17 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd3B1AR17 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd3B1AR17 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.65□□□□□ -0.22
Chd3B1AR17 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
Chd3B1AR17 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd3B1AR17 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd3B1AR17 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Chd3B1AR17 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd3B1AR17 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chd3B1AR17 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd3B1AR17 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.64□□□□□ -0.23
Chd3B1AR17 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd3B1AR17 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd3B1AR17 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd3B1AR17 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd3B1AR17 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chd3B1AR17 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chd3B1AR17 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd3B1AR17 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd3B1AR17 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.64□□□□□ -0.23
Chd3B1AR17 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.64□□□□□ -0.23
Chd3B1AR17 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.64□□□□□ -0.23
Chd3B1AR17 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Chd3B1AR17 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.64□□□□□ -0.23
Chd3B1AR17 Gm27772-201ENSMUST00000184900 187 ntBASIC13.64□□□□□ -0.23
Chd3B1AR17 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chd3B1AR17 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd3B1AR17 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd3B1AR17 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd3B1AR17 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd3B1AR17 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Chd3B1AR17 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chd3B1AR17 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.64□□□□□ -0.23
Chd3B1AR17 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd3B1AR17 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Chd3B1AR17 Gm18187-201ENSMUST00000196476 984 ntBASIC13.63□□□□□ -0.23
Chd3B1AR17 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chd3B1AR17 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chd3B1AR17 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Chd3B1AR17 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
Chd3B1AR17 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Chd3B1AR17 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.63□□□□□ -0.23
Chd3B1AR17 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd3B1AR17 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd3B1AR17 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd3B1AR17 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd3B1AR17 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd3B1AR17 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Chd3B1AR17 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd3B1AR17 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chd3B1AR17 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd3B1AR17 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd3B1AR17 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd3B1AR17 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.63□□□□□ -0.23
Chd3B1AR17 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Chd3B1AR17 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chd3B1AR17 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.63□□□□□ -0.23
Chd3B1AR17 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.63□□□□□ -0.23
Chd3B1AR17 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd3B1AR17 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.63□□□□□ -0.23
Chd3B1AR17 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.63□□□□□ -0.23
Chd3B1AR17 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chd3B1AR17 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.63□□□□□ -0.23
Chd3B1AR17 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.63□□□□□ -0.23
Chd3B1AR17 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd3B1AR17 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd3B1AR17 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd3B1AR17 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd3B1AR17 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Chd3B1AR17 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chd3B1AR17 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Chd3B1AR17 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd3B1AR17 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd3B1AR17 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd3B1AR17 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.62□□□□□ -0.23
Chd3B1AR17 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms