Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Gm17271-201ENSMUST00000165535 355 ntBASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Gm2272-201ENSMUST00000194903 582 ntBASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 AC174742.1-201ENSMUST00000218272 304 ntBASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav6n-6A0A075B6B2 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 AC119177.1-201ENSMUST00000227647 1332 ntBASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 AC154595.3-201ENSMUST00000224579 384 ntBASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Ssr1-203ENSMUST00000225246 1825 ntBASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Gm9924-202ENSMUST00000192760 2311 ntBASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav6n-6A0A075B6B2 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms