Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Gm4913-201ENSMUST00000117075 1290 ntBASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Gm8584-201ENSMUST00000171982 758 ntBASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Gm8000-201ENSMUST00000188378 592 ntBASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Gm18057-201ENSMUST00000208220 503 ntBASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 AW822252-206ENSMUST00000208904 237 ntBASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Gm10175-201ENSMUST00000086013 645 ntBASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5-4A0A075B652 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav5-4A0A075B652 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.71□□□□□ -0.53
Trav5-4A0A075B652 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Trav5-4A0A075B652 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5-4A0A075B652 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5-4A0A075B652 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5-4A0A075B652 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5-4A0A075B652 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5-4A0A075B652 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5-4A0A075B652 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5-4A0A075B652 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5-4A0A075B652 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5-4A0A075B652 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Trav5-4A0A075B652 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5-4A0A075B652 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5-4A0A075B652 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5-4A0A075B652 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5-4A0A075B652 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5-4A0A075B652 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5-4A0A075B652 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trav5-4A0A075B652 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5-4A0A075B652 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5-4A0A075B652 H2af-ps-201ENSMUST00000119066 295 ntBASIC11.71□□□□□ -0.53
Trav5-4A0A075B652 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5-4A0A075B652 Gm27525-201ENSMUST00000184465 107 ntBASIC11.71□□□□□ -0.53
Trav5-4A0A075B652 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.71□□□□□ -0.53
Trav5-4A0A075B652 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC11.71□□□□□ -0.53
Trav5-4A0A075B652 Gm45612-201ENSMUST00000211320 160 ntBASIC11.71□□□□□ -0.53
Trav5-4A0A075B652 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC11.71□□□□□ -0.53
Trav5-4A0A075B652 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav5-4A0A075B652 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5-4A0A075B652 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5-4A0A075B652 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5-4A0A075B652 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5-4A0A075B652 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5-4A0A075B652 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.71□□□□□ -0.54
Trav5-4A0A075B652 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.71□□□□□ -0.54
Trav5-4A0A075B652 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav5-4A0A075B652 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav5-4A0A075B652 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav5-4A0A075B652 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trav5-4A0A075B652 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.71□□□□□ -0.54
Trav5-4A0A075B652 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav5-4A0A075B652 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trav5-4A0A075B652 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav5-4A0A075B652 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav5-4A0A075B652 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.7□□□□□ -0.54
Trav5-4A0A075B652 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav5-4A0A075B652 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav5-4A0A075B652 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav5-4A0A075B652 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav5-4A0A075B652 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav5-4A0A075B652 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav5-4A0A075B652 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav5-4A0A075B652 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms