Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav7n-5A0A075B604 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7n-5A0A075B604 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7n-5A0A075B604 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav7n-5A0A075B604 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7n-5A0A075B604 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7n-5A0A075B604 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7n-5A0A075B604 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7n-5A0A075B604 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7n-5A0A075B604 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7n-5A0A075B604 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav7n-5A0A075B604 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Trav7n-5A0A075B604 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7n-5A0A075B604 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav7n-5A0A075B604 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav7n-5A0A075B604 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav7n-5A0A075B604 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.46□□□□□ -0.58
Trav7n-5A0A075B604 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav7n-5A0A075B604 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav7n-5A0A075B604 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav7n-5A0A075B604 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav7n-5A0A075B604 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Trav7n-5A0A075B604 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav7n-5A0A075B604 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav7n-5A0A075B604 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav7n-5A0A075B604 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav7n-5A0A075B604 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.46□□□□□ -0.58
Trav7n-5A0A075B604 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Gm9522-201ENSMUST00000182394 926 ntBASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Gm29667-201ENSMUST00000190817 490 ntBASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.45□□□□□ -0.58
Trav7n-5A0A075B604 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7n-5A0A075B604 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.44□□□□□ -0.58
Trav7n-5A0A075B604 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav7n-5A0A075B604 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7n-5A0A075B604 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7n-5A0A075B604 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7n-5A0A075B604 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7n-5A0A075B604 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav7n-5A0A075B604 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.44□□□□□ -0.58
Trav7n-5A0A075B604 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7n-5A0A075B604 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7n-5A0A075B604 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7n-5A0A075B604 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav7n-5A0A075B604 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7n-5A0A075B604 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7n-5A0A075B604 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7n-5A0A075B604 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7n-5A0A075B604 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav7n-5A0A075B604 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav7n-5A0A075B604 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav7n-5A0A075B604 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7n-5A0A075B604 Mir698-201ENSMUST00000102164 109 ntBASIC11.44□□□□□ -0.58
Trav7n-5A0A075B604 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.44□□□□□ -0.58
Trav7n-5A0A075B604 Gm24420-201ENSMUST00000176676 59 ntBASIC11.44□□□□□ -0.58
Trav7n-5A0A075B604 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Trav7n-5A0A075B604 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.44□□□□□ -0.58
Trav7n-5A0A075B604 Gm44719-201ENSMUST00000206404 149 ntBASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms