Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
H2afb2S4R1M3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
H2afb2S4R1M3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
H2afb2S4R1M3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
H2afb2S4R1M3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
H2afb2S4R1M3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
H2afb2S4R1M3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
H2afb2S4R1M3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.76■■□□□ 1.07
H2afb2S4R1M3 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
H2afb2S4R1M3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
H2afb2S4R1M3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
H2afb2S4R1M3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
H2afb2S4R1M3 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
H2afb2S4R1M3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
H2afb2S4R1M3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
H2afb2S4R1M3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.74■■□□□ 1.07
H2afb2S4R1M3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.74■■□□□ 1.07
H2afb2S4R1M3 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.74■■□□□ 1.07
H2afb2S4R1M3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
H2afb2S4R1M3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
H2afb2S4R1M3 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
H2afb2S4R1M3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
H2afb2S4R1M3 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.73■■□□□ 1.07
H2afb2S4R1M3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
H2afb2S4R1M3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.73■■□□□ 1.07
H2afb2S4R1M3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
H2afb2S4R1M3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
H2afb2S4R1M3 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
H2afb2S4R1M3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
H2afb2S4R1M3 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
H2afb2S4R1M3 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
H2afb2S4R1M3 Gm14523-201ENSMUST00000117260 558 ntBASIC21.72■■□□□ 1.07
H2afb2S4R1M3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.72■■□□□ 1.07
H2afb2S4R1M3 Mir6538-201ENSMUST00000183713 110 ntBASIC21.72■■□□□ 1.07
H2afb2S4R1M3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
H2afb2S4R1M3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
H2afb2S4R1M3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
H2afb2S4R1M3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
H2afb2S4R1M3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.72■■□□□ 1.07
H2afb2S4R1M3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
H2afb2S4R1M3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
H2afb2S4R1M3 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
H2afb2S4R1M3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
H2afb2S4R1M3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
H2afb2S4R1M3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
H2afb2S4R1M3 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
H2afb2S4R1M3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
H2afb2S4R1M3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.71■■□□□ 1.07
H2afb2S4R1M3 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
H2afb2S4R1M3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
H2afb2S4R1M3 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
H2afb2S4R1M3 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
H2afb2S4R1M3 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
H2afb2S4R1M3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
H2afb2S4R1M3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
H2afb2S4R1M3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
H2afb2S4R1M3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
H2afb2S4R1M3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
H2afb2S4R1M3 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.69■■□□□ 1.06
H2afb2S4R1M3 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
H2afb2S4R1M3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
H2afb2S4R1M3 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
H2afb2S4R1M3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
H2afb2S4R1M3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.68■■□□□ 1.06
H2afb2S4R1M3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.68■■□□□ 1.06
H2afb2S4R1M3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.68■■□□□ 1.06
H2afb2S4R1M3 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.68■■□□□ 1.06
H2afb2S4R1M3 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
H2afb2S4R1M3 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
H2afb2S4R1M3 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
H2afb2S4R1M3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
H2afb2S4R1M3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.67■■□□□ 1.06
H2afb2S4R1M3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
H2afb2S4R1M3 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
H2afb2S4R1M3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.66■■□□□ 1.06
H2afb2S4R1M3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
H2afb2S4R1M3 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
H2afb2S4R1M3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
H2afb2S4R1M3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
H2afb2S4R1M3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
H2afb2S4R1M3 Gm7332-201ENSMUST00000118351 454 ntBASIC21.65■■□□□ 1.06
H2afb2S4R1M3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
H2afb2S4R1M3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
H2afb2S4R1M3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
H2afb2S4R1M3 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
H2afb2S4R1M3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
H2afb2S4R1M3 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
H2afb2S4R1M3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
H2afb2S4R1M3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
H2afb2S4R1M3 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.64■■□□□ 1.06
H2afb2S4R1M3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
H2afb2S4R1M3 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
H2afb2S4R1M3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.64■■□□□ 1.05
H2afb2S4R1M3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
H2afb2S4R1M3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
H2afb2S4R1M3 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
H2afb2S4R1M3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
H2afb2S4R1M3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
H2afb2S4R1M3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
H2afb2S4R1M3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms