Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
Smarcb1Q9Z0H3 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Smarcb1Q9Z0H3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
Smarcb1Q9Z0H3 Rps24-207ENSMUST00000224568 714 ntBASIC22.75■■□□□ 1.23
Smarcb1Q9Z0H3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Smarcb1Q9Z0H3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Smarcb1Q9Z0H3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Smarcb1Q9Z0H3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Smarcb1Q9Z0H3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Smarcb1Q9Z0H3 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Smarcb1Q9Z0H3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC22.74■■□□□ 1.23
Smarcb1Q9Z0H3 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC22.74■■□□□ 1.23
Smarcb1Q9Z0H3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC22.74■■□□□ 1.23
Smarcb1Q9Z0H3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC22.74■■□□□ 1.23
Smarcb1Q9Z0H3 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Smarcb1Q9Z0H3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC22.73■■□□□ 1.23
Smarcb1Q9Z0H3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Smarcb1Q9Z0H3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Smarcb1Q9Z0H3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
Smarcb1Q9Z0H3 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22.73■■□□□ 1.23
Smarcb1Q9Z0H3 Gm22567-201ENSMUST00000175542 342 ntBASIC22.72■■□□□ 1.23
Smarcb1Q9Z0H3 Gm45102-201ENSMUST00000207427 857 ntBASIC22.72■■□□□ 1.23
Smarcb1Q9Z0H3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.72■■□□□ 1.23
Smarcb1Q9Z0H3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Smarcb1Q9Z0H3 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Smarcb1Q9Z0H3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Smarcb1Q9Z0H3 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Smarcb1Q9Z0H3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Smarcb1Q9Z0H3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Smarcb1Q9Z0H3 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Smarcb1Q9Z0H3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Smarcb1Q9Z0H3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Smarcb1Q9Z0H3 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.7■■□□□ 1.22
Smarcb1Q9Z0H3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Smarcb1Q9Z0H3 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Smarcb1Q9Z0H3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Smarcb1Q9Z0H3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Smarcb1Q9Z0H3 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.69■■□□□ 1.22
Smarcb1Q9Z0H3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Smarcb1Q9Z0H3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Smarcb1Q9Z0H3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Smarcb1Q9Z0H3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.68■■□□□ 1.22
Smarcb1Q9Z0H3 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC22.68■■□□□ 1.22
Smarcb1Q9Z0H3 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Smarcb1Q9Z0H3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Smarcb1Q9Z0H3 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC22.67■■□□□ 1.22
Smarcb1Q9Z0H3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Smarcb1Q9Z0H3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Smarcb1Q9Z0H3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Smarcb1Q9Z0H3 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.66■■□□□ 1.22
Smarcb1Q9Z0H3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
Smarcb1Q9Z0H3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Smarcb1Q9Z0H3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
Smarcb1Q9Z0H3 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Smarcb1Q9Z0H3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Smarcb1Q9Z0H3 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Smarcb1Q9Z0H3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Smarcb1Q9Z0H3 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Smarcb1Q9Z0H3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Smarcb1Q9Z0H3 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Smarcb1Q9Z0H3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Smarcb1Q9Z0H3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC22.64■■□□□ 1.21
Smarcb1Q9Z0H3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Smarcb1Q9Z0H3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Smarcb1Q9Z0H3 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Smarcb1Q9Z0H3 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Smarcb1Q9Z0H3 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC22.63■■□□□ 1.21
Smarcb1Q9Z0H3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Smarcb1Q9Z0H3 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Smarcb1Q9Z0H3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Smarcb1Q9Z0H3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.62■■□□□ 1.21
Smarcb1Q9Z0H3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC22.62■■□□□ 1.21
Smarcb1Q9Z0H3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC22.62■■□□□ 1.21
Smarcb1Q9Z0H3 Gm9959-201ENSMUST00000068277 390 ntBASIC22.62■■□□□ 1.21
Smarcb1Q9Z0H3 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Smarcb1Q9Z0H3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Smarcb1Q9Z0H3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Smarcb1Q9Z0H3 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Smarcb1Q9Z0H3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Smarcb1Q9Z0H3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Smarcb1Q9Z0H3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Smarcb1Q9Z0H3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Smarcb1Q9Z0H3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC22.6■■□□□ 1.21
Smarcb1Q9Z0H3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Smarcb1Q9Z0H3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC22.59■■□□□ 1.21
Smarcb1Q9Z0H3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Smarcb1Q9Z0H3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Smarcb1Q9Z0H3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Smarcb1Q9Z0H3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Smarcb1Q9Z0H3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Smarcb1Q9Z0H3 Gm14117-201ENSMUST00000122417 843 ntBASIC22.58■■□□□ 1.21
Smarcb1Q9Z0H3 Gm11847-201ENSMUST00000125165 1119 ntBASIC22.58■■□□□ 1.21
Smarcb1Q9Z0H3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.58■■□□□ 1.21
Smarcb1Q9Z0H3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Smarcb1Q9Z0H3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Smarcb1Q9Z0H3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Smarcb1Q9Z0H3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Smarcb1Q9Z0H3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Smarcb1Q9Z0H3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Smarcb1Q9Z0H3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms