Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Scn5aQ9JJV9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC23.01■■□□□ 1.27
Scn5aQ9JJV9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Scn5aQ9JJV9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Scn5aQ9JJV9 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Scn5aQ9JJV9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC23■■□□□ 1.27
Scn5aQ9JJV9 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Scn5aQ9JJV9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Scn5aQ9JJV9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Scn5aQ9JJV9 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Scn5aQ9JJV9 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Scn5aQ9JJV9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC22.99■■□□□ 1.27
Scn5aQ9JJV9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Scn5aQ9JJV9 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Scn5aQ9JJV9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Scn5aQ9JJV9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Scn5aQ9JJV9 Gm7417-201ENSMUST00000192950 473 ntBASIC22.98■■□□□ 1.27
Scn5aQ9JJV9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Scn5aQ9JJV9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Scn5aQ9JJV9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Scn5aQ9JJV9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Scn5aQ9JJV9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Scn5aQ9JJV9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Scn5aQ9JJV9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Scn5aQ9JJV9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Scn5aQ9JJV9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Scn5aQ9JJV9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Scn5aQ9JJV9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Scn5aQ9JJV9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Scn5aQ9JJV9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Scn5aQ9JJV9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC22.96■■□□□ 1.27
Scn5aQ9JJV9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC22.96■■□□□ 1.27
Scn5aQ9JJV9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Scn5aQ9JJV9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC22.96■■□□□ 1.27
Scn5aQ9JJV9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
Scn5aQ9JJV9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.95■■□□□ 1.26
Scn5aQ9JJV9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Scn5aQ9JJV9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Scn5aQ9JJV9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC22.94■■□□□ 1.26
Scn5aQ9JJV9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC22.94■■□□□ 1.26
Scn5aQ9JJV9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Scn5aQ9JJV9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22.94■■□□□ 1.26
Scn5aQ9JJV9 Gm22238-201ENSMUST00000175222 88 ntBASIC22.93■■□□□ 1.26
Scn5aQ9JJV9 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Scn5aQ9JJV9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Scn5aQ9JJV9 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC22.92■■□□□ 1.26
Scn5aQ9JJV9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Scn5aQ9JJV9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Scn5aQ9JJV9 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Scn5aQ9JJV9 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Scn5aQ9JJV9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Scn5aQ9JJV9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Scn5aQ9JJV9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Scn5aQ9JJV9 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Scn5aQ9JJV9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Scn5aQ9JJV9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC22.91■■□□□ 1.26
Scn5aQ9JJV9 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Scn5aQ9JJV9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Scn5aQ9JJV9 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Scn5aQ9JJV9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Scn5aQ9JJV9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
Scn5aQ9JJV9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Scn5aQ9JJV9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.9■■□□□ 1.26
Scn5aQ9JJV9 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Scn5aQ9JJV9 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Scn5aQ9JJV9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Scn5aQ9JJV9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Scn5aQ9JJV9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC22.89■■□□□ 1.26
Scn5aQ9JJV9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.89■■□□□ 1.26
Scn5aQ9JJV9 Gm13241-201ENSMUST00000094493 780 ntBASIC22.89■■□□□ 1.26
Scn5aQ9JJV9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.89■■□□□ 1.26
Scn5aQ9JJV9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Scn5aQ9JJV9 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.89■■□□□ 1.26
Scn5aQ9JJV9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.89■■□□□ 1.25
Scn5aQ9JJV9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.89■■□□□ 1.25
Scn5aQ9JJV9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
Scn5aQ9JJV9 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.89■■□□□ 1.25
Scn5aQ9JJV9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Scn5aQ9JJV9 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Scn5aQ9JJV9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Scn5aQ9JJV9 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Scn5aQ9JJV9 Gm9847-201ENSMUST00000052528 599 ntBASIC22.87■■□□□ 1.25
Scn5aQ9JJV9 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Scn5aQ9JJV9 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Scn5aQ9JJV9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Scn5aQ9JJV9 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Scn5aQ9JJV9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Scn5aQ9JJV9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC22.86■■□□□ 1.25
Scn5aQ9JJV9 Gm43034-201ENSMUST00000198678 1364 ntBASIC22.86■■□□□ 1.25
Scn5aQ9JJV9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Scn5aQ9JJV9 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.86■■□□□ 1.25
Scn5aQ9JJV9 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Scn5aQ9JJV9 Gm11847-201ENSMUST00000125165 1119 ntBASIC22.85■■□□□ 1.25
Scn5aQ9JJV9 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC22.85■■□□□ 1.25
Scn5aQ9JJV9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Scn5aQ9JJV9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.85■■□□□ 1.25
Scn5aQ9JJV9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Scn5aQ9JJV9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Scn5aQ9JJV9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Scn5aQ9JJV9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC22.84■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms