Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rbfox1Q9JJ43 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rbfox1Q9JJ43 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rbfox1Q9JJ43 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Rbfox1Q9JJ43 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rbfox1Q9JJ43 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rbfox1Q9JJ43 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rbfox1Q9JJ43 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rbfox1Q9JJ43 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rbfox1Q9JJ43 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rbfox1Q9JJ43 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rbfox1Q9JJ43 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rbfox1Q9JJ43 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rbfox1Q9JJ43 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.48■□□□□ 0.55
Rbfox1Q9JJ43 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rbfox1Q9JJ43 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rbfox1Q9JJ43 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rbfox1Q9JJ43 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rbfox1Q9JJ43 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rbfox1Q9JJ43 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Rbfox1Q9JJ43 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rbfox1Q9JJ43 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.47■□□□□ 0.55
Rbfox1Q9JJ43 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rbfox1Q9JJ43 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rbfox1Q9JJ43 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.46■□□□□ 0.55
Rbfox1Q9JJ43 Notumos-201ENSMUST00000151998 2659 ntBASIC18.46■□□□□ 0.55
Rbfox1Q9JJ43 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Rbfox1Q9JJ43 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Rbfox1Q9JJ43 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Rbfox1Q9JJ43 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.45■□□□□ 0.54
Rbfox1Q9JJ43 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rbfox1Q9JJ43 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rbfox1Q9JJ43 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rbfox1Q9JJ43 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rbfox1Q9JJ43 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rbfox1Q9JJ43 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rbfox1Q9JJ43 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rbfox1Q9JJ43 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rbfox1Q9JJ43 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rbfox1Q9JJ43 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rbfox1Q9JJ43 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.44■□□□□ 0.54
Rbfox1Q9JJ43 Gm44428-201ENSMUST00000204474 874 ntBASIC18.44■□□□□ 0.54
Rbfox1Q9JJ43 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rbfox1Q9JJ43 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rbfox1Q9JJ43 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rbfox1Q9JJ43 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rbfox1Q9JJ43 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rbfox1Q9JJ43 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rbfox1Q9JJ43 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rbfox1Q9JJ43 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rbfox1Q9JJ43 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.44■□□□□ 0.54
Rbfox1Q9JJ43 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rbfox1Q9JJ43 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rbfox1Q9JJ43 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rbfox1Q9JJ43 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rbfox1Q9JJ43 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rbfox1Q9JJ43 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rbfox1Q9JJ43 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rbfox1Q9JJ43 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rbfox1Q9JJ43 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rbfox1Q9JJ43 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rbfox1Q9JJ43 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rbfox1Q9JJ43 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rbfox1Q9JJ43 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rbfox1Q9JJ43 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.41■□□□□ 0.54
Rbfox1Q9JJ43 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.41■□□□□ 0.54
Rbfox1Q9JJ43 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rbfox1Q9JJ43 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rbfox1Q9JJ43 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rbfox1Q9JJ43 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Rbfox1Q9JJ43 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
Rbfox1Q9JJ43 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rbfox1Q9JJ43 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rbfox1Q9JJ43 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rbfox1Q9JJ43 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rbfox1Q9JJ43 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Rbfox1Q9JJ43 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rbfox1Q9JJ43 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Rbfox1Q9JJ43 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.4■□□□□ 0.54
Rbfox1Q9JJ43 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.4■□□□□ 0.54
Rbfox1Q9JJ43 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rbfox1Q9JJ43 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rbfox1Q9JJ43 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rbfox1Q9JJ43 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Rbfox1Q9JJ43 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rbfox1Q9JJ43 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rbfox1Q9JJ43 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Rbfox1Q9JJ43 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
Rbfox1Q9JJ43 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rbfox1Q9JJ43 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rbfox1Q9JJ43 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rbfox1Q9JJ43 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rbfox1Q9JJ43 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rbfox1Q9JJ43 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.39■□□□□ 0.53
Rbfox1Q9JJ43 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rbfox1Q9JJ43 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rbfox1Q9JJ43 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rbfox1Q9JJ43 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rbfox1Q9JJ43 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rbfox1Q9JJ43 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms