Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf13bQ9ET35 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Tnfrsf13bQ9ET35 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf13bQ9ET35 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf13bQ9ET35 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Tnfrsf13bQ9ET35 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.13■□□□□ 0.33
Tnfrsf13bQ9ET35 Gm6821-201ENSMUST00000107540 542 ntBASIC17.13■□□□□ 0.33
Tnfrsf13bQ9ET35 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Tnfrsf13bQ9ET35 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.13■□□□□ 0.33
Tnfrsf13bQ9ET35 Gm4799-201ENSMUST00000095396 657 ntBASIC17.13■□□□□ 0.33
Tnfrsf13bQ9ET35 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf13bQ9ET35 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf13bQ9ET35 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf13bQ9ET35 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf13bQ9ET35 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf13bQ9ET35 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf13bQ9ET35 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf13bQ9ET35 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf13bQ9ET35 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Tnfrsf13bQ9ET35 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf13bQ9ET35 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Tnfrsf13bQ9ET35 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
Tnfrsf13bQ9ET35 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.12■□□□□ 0.33
Tnfrsf13bQ9ET35 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.12■□□□□ 0.33
Tnfrsf13bQ9ET35 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf13bQ9ET35 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Tnfrsf13bQ9ET35 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf13bQ9ET35 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.12■□□□□ 0.33
Tnfrsf13bQ9ET35 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf13bQ9ET35 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.11■□□□□ 0.33
Tnfrsf13bQ9ET35 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Tnfrsf13bQ9ET35 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.11■□□□□ 0.33
Tnfrsf13bQ9ET35 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
Tnfrsf13bQ9ET35 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf13bQ9ET35 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Tnfrsf13bQ9ET35 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf13bQ9ET35 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf13bQ9ET35 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf13bQ9ET35 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf13bQ9ET35 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf13bQ9ET35 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.1■□□□□ 0.33
Tnfrsf13bQ9ET35 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf13bQ9ET35 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf13bQ9ET35 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Tnfrsf13bQ9ET35 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Tnfrsf13bQ9ET35 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf13bQ9ET35 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf13bQ9ET35 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Tnfrsf13bQ9ET35 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.08■□□□□ 0.33
Tnfrsf13bQ9ET35 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.08■□□□□ 0.32
Tnfrsf13bQ9ET35 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf13bQ9ET35 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf13bQ9ET35 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf13bQ9ET35 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf13bQ9ET35 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf13bQ9ET35 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf13bQ9ET35 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf13bQ9ET35 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf13bQ9ET35 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf13bQ9ET35 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf13bQ9ET35 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.07■□□□□ 0.32
Tnfrsf13bQ9ET35 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Tnfrsf13bQ9ET35 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf13bQ9ET35 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf13bQ9ET35 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf13bQ9ET35 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf13bQ9ET35 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf13bQ9ET35 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf13bQ9ET35 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Tnfrsf13bQ9ET35 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf13bQ9ET35 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.06■□□□□ 0.32
Tnfrsf13bQ9ET35 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.06■□□□□ 0.32
Tnfrsf13bQ9ET35 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf13bQ9ET35 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.06■□□□□ 0.32
Tnfrsf13bQ9ET35 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf13bQ9ET35 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf13bQ9ET35 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf13bQ9ET35 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf13bQ9ET35 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Tnfrsf13bQ9ET35 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.05■□□□□ 0.32
Tnfrsf13bQ9ET35 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf13bQ9ET35 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf13bQ9ET35 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf13bQ9ET35 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf13bQ9ET35 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.04■□□□□ 0.32
Tnfrsf13bQ9ET35 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf13bQ9ET35 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.04■□□□□ 0.32
Tnfrsf13bQ9ET35 Terc-201ENSMUST00000082862 423 ntBASIC17.04■□□□□ 0.32
Tnfrsf13bQ9ET35 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf13bQ9ET35 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf13bQ9ET35 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.04■□□□□ 0.32
Tnfrsf13bQ9ET35 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf13bQ9ET35 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf13bQ9ET35 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf13bQ9ET35 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfrsf13bQ9ET35 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfrsf13bQ9ET35 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Tnfrsf13bQ9ET35 Mir3960-201ENSMUST00000198213 73 ntBASIC17.03■□□□□ 0.32
Tnfrsf13bQ9ET35 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfrsf13bQ9ET35 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms