Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtp4Q9ER80 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rtp4Q9ER80 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rtp4Q9ER80 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Rtp4Q9ER80 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rtp4Q9ER80 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rtp4Q9ER80 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rtp4Q9ER80 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Rtp4Q9ER80 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Rtp4Q9ER80 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.33■□□□□ 0.84
Rtp4Q9ER80 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.33■□□□□ 0.84
Rtp4Q9ER80 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rtp4Q9ER80 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rtp4Q9ER80 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Rtp4Q9ER80 Gm5812-201ENSMUST00000061073 957 ntBASIC20.32■□□□□ 0.84
Rtp4Q9ER80 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rtp4Q9ER80 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rtp4Q9ER80 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rtp4Q9ER80 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rtp4Q9ER80 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rtp4Q9ER80 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rtp4Q9ER80 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Rtp4Q9ER80 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rtp4Q9ER80 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.31■□□□□ 0.84
Rtp4Q9ER80 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rtp4Q9ER80 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
Rtp4Q9ER80 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rtp4Q9ER80 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.3■□□□□ 0.84
Rtp4Q9ER80 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.3■□□□□ 0.84
Rtp4Q9ER80 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rtp4Q9ER80 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rtp4Q9ER80 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rtp4Q9ER80 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rtp4Q9ER80 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Rtp4Q9ER80 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rtp4Q9ER80 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rtp4Q9ER80 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rtp4Q9ER80 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rtp4Q9ER80 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.28■□□□□ 0.84
Rtp4Q9ER80 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.28■□□□□ 0.84
Rtp4Q9ER80 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rtp4Q9ER80 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rtp4Q9ER80 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
Rtp4Q9ER80 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.27■□□□□ 0.84
Rtp4Q9ER80 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rtp4Q9ER80 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.27■□□□□ 0.83
Rtp4Q9ER80 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rtp4Q9ER80 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Rtp4Q9ER80 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rtp4Q9ER80 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rtp4Q9ER80 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Rtp4Q9ER80 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rtp4Q9ER80 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rtp4Q9ER80 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.26■□□□□ 0.83
Rtp4Q9ER80 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.26■□□□□ 0.83
Rtp4Q9ER80 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rtp4Q9ER80 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtp4Q9ER80 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.25■□□□□ 0.83
Rtp4Q9ER80 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rtp4Q9ER80 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Rtp4Q9ER80 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.25■□□□□ 0.83
Rtp4Q9ER80 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rtp4Q9ER80 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Rtp4Q9ER80 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rtp4Q9ER80 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Rtp4Q9ER80 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtp4Q9ER80 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtp4Q9ER80 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtp4Q9ER80 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtp4Q9ER80 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Rtp4Q9ER80 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.23■□□□□ 0.83
Rtp4Q9ER80 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.23■□□□□ 0.83
Rtp4Q9ER80 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Rtp4Q9ER80 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtp4Q9ER80 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.23■□□□□ 0.83
Rtp4Q9ER80 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Rtp4Q9ER80 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Rtp4Q9ER80 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Rtp4Q9ER80 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rtp4Q9ER80 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.22■□□□□ 0.83
Rtp4Q9ER80 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtp4Q9ER80 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.21■□□□□ 0.83
Rtp4Q9ER80 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rtp4Q9ER80 Gm13238-201ENSMUST00000117655 780 ntBASIC20.21■□□□□ 0.83
Rtp4Q9ER80 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Rtp4Q9ER80 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rtp4Q9ER80 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.21■□□□□ 0.83
Rtp4Q9ER80 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Rtp4Q9ER80 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtp4Q9ER80 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtp4Q9ER80 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtp4Q9ER80 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.2■□□□□ 0.82
Rtp4Q9ER80 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rtp4Q9ER80 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Rtp4Q9ER80 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rtp4Q9ER80 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Rtp4Q9ER80 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.2■□□□□ 0.82
Rtp4Q9ER80 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.2■□□□□ 0.82
Rtp4Q9ER80 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtp4Q9ER80 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 181.2 ms