Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
Upf1Q9EPU0 Gm6139-201ENSMUST00000079261 882 ntBASIC25.91■■□□□ 1.74
Upf1Q9EPU0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Upf1Q9EPU0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Upf1Q9EPU0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Upf1Q9EPU0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC25.9■■□□□ 1.74
Upf1Q9EPU0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Upf1Q9EPU0 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Upf1Q9EPU0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Upf1Q9EPU0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC25.89■■□□□ 1.74
Upf1Q9EPU0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC25.89■■□□□ 1.74
Upf1Q9EPU0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC25.88■■□□□ 1.73
Upf1Q9EPU0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Upf1Q9EPU0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC25.87■■□□□ 1.73
Upf1Q9EPU0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC25.87■■□□□ 1.73
Upf1Q9EPU0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Upf1Q9EPU0 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC25.86■■□□□ 1.73
Upf1Q9EPU0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Upf1Q9EPU0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC25.86■■□□□ 1.73
Upf1Q9EPU0 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Upf1Q9EPU0 Gm4419-202ENSMUST00000226239 1431 ntBASIC25.86■■□□□ 1.73
Upf1Q9EPU0 Gm28536-201ENSMUST00000190971 1317 ntBASIC25.86■■□□□ 1.73
Upf1Q9EPU0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
Upf1Q9EPU0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC25.85■■□□□ 1.73
Upf1Q9EPU0 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Upf1Q9EPU0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Upf1Q9EPU0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Upf1Q9EPU0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Upf1Q9EPU0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Upf1Q9EPU0 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC25.84■■□□□ 1.73
Upf1Q9EPU0 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Upf1Q9EPU0 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Upf1Q9EPU0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Upf1Q9EPU0 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
Upf1Q9EPU0 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Upf1Q9EPU0 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
Upf1Q9EPU0 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC25.82■■□□□ 1.72
Upf1Q9EPU0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Upf1Q9EPU0 Gm10399-202ENSMUST00000202768 748 ntBASIC25.81■■□□□ 1.72
Upf1Q9EPU0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
Upf1Q9EPU0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Upf1Q9EPU0 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC25.8■■□□□ 1.72
Upf1Q9EPU0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Upf1Q9EPU0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Upf1Q9EPU0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC25.79■■□□□ 1.72
Upf1Q9EPU0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC25.79■■□□□ 1.72
Upf1Q9EPU0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC25.79■■□□□ 1.72
Upf1Q9EPU0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Upf1Q9EPU0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Upf1Q9EPU0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Upf1Q9EPU0 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Upf1Q9EPU0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Upf1Q9EPU0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Upf1Q9EPU0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC25.77■■□□□ 1.72
Upf1Q9EPU0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Upf1Q9EPU0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Upf1Q9EPU0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Upf1Q9EPU0 Gm26571-201ENSMUST00000181399 666 ntBASIC25.76■■□□□ 1.71
Upf1Q9EPU0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC25.76■■□□□ 1.71
Upf1Q9EPU0 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Upf1Q9EPU0 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
Upf1Q9EPU0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
Upf1Q9EPU0 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Upf1Q9EPU0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC25.75■■□□□ 1.71
Upf1Q9EPU0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
Upf1Q9EPU0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC25.75■■□□□ 1.71
Upf1Q9EPU0 CT025689.6-201ENSMUST00000224991 1104 ntBASIC25.75■■□□□ 1.71
Upf1Q9EPU0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Upf1Q9EPU0 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
Upf1Q9EPU0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
Upf1Q9EPU0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC25.74■■□□□ 1.71
Upf1Q9EPU0 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC25.74■■□□□ 1.71
Upf1Q9EPU0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Upf1Q9EPU0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC25.73■■□□□ 1.71
Upf1Q9EPU0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
Upf1Q9EPU0 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Upf1Q9EPU0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Upf1Q9EPU0 Gm9207-201ENSMUST00000198773 1115 ntBASIC25.72■■□□□ 1.71
Upf1Q9EPU0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Upf1Q9EPU0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC25.71■■□□□ 1.71
Upf1Q9EPU0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Upf1Q9EPU0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Upf1Q9EPU0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC25.7■■□□□ 1.71
Upf1Q9EPU0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC25.7■■□□□ 1.7
Upf1Q9EPU0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
Upf1Q9EPU0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.69■■□□□ 1.7
Upf1Q9EPU0 Gm27405-201ENSMUST00000184201 112 ntBASIC25.69■■□□□ 1.7
Upf1Q9EPU0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Upf1Q9EPU0 Gm43017-201ENSMUST00000198296 752 ntBASIC25.68■■□□□ 1.7
Upf1Q9EPU0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Upf1Q9EPU0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Upf1Q9EPU0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Upf1Q9EPU0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Upf1Q9EPU0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
Upf1Q9EPU0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC25.67■■□□□ 1.7
Upf1Q9EPU0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Upf1Q9EPU0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Upf1Q9EPU0 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Upf1Q9EPU0 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Upf1Q9EPU0 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms