Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.44■■□□□ 1.02
Rrp8Q9DB85 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.44■■□□□ 1.02
Rrp8Q9DB85 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.44■■□□□ 1.02
Rrp8Q9DB85 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rrp8Q9DB85 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rrp8Q9DB85 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rrp8Q9DB85 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rrp8Q9DB85 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rrp8Q9DB85 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rrp8Q9DB85 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Rrp8Q9DB85 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Rrp8Q9DB85 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rrp8Q9DB85 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rrp8Q9DB85 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Rrp8Q9DB85 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Rrp8Q9DB85 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rrp8Q9DB85 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.41■■□□□ 1.02
Rrp8Q9DB85 Gm13241-201ENSMUST00000094493 780 ntBASIC21.41■■□□□ 1.02
Rrp8Q9DB85 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rrp8Q9DB85 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rrp8Q9DB85 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rrp8Q9DB85 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.4■■□□□ 1.02
Rrp8Q9DB85 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Rrp8Q9DB85 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rrp8Q9DB85 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rrp8Q9DB85 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.4■■□□□ 1.02
Rrp8Q9DB85 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rrp8Q9DB85 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.4■■□□□ 1.02
Rrp8Q9DB85 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rrp8Q9DB85 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rrp8Q9DB85 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rrp8Q9DB85 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Rrp8Q9DB85 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Rrp8Q9DB85 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rrp8Q9DB85 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rrp8Q9DB85 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.38■■□□□ 1.01
Rrp8Q9DB85 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Rrp8Q9DB85 Gm40881-201ENSMUST00000223397 166 ntBASIC21.38■■□□□ 1.01
Rrp8Q9DB85 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rrp8Q9DB85 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.37■■□□□ 1.01
Rrp8Q9DB85 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rrp8Q9DB85 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.37■■□□□ 1.01
Rrp8Q9DB85 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rrp8Q9DB85 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rrp8Q9DB85 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
Rrp8Q9DB85 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rrp8Q9DB85 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.36■■□□□ 1.01
Rrp8Q9DB85 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rrp8Q9DB85 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rrp8Q9DB85 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rrp8Q9DB85 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Rrp8Q9DB85 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
Rrp8Q9DB85 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rrp8Q9DB85 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Rrp8Q9DB85 Gm9847-201ENSMUST00000052528 599 ntBASIC21.35■■□□□ 1.01
Rrp8Q9DB85 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rrp8Q9DB85 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rrp8Q9DB85 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rrp8Q9DB85 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Rrp8Q9DB85 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Rrp8Q9DB85 Gm22238-201ENSMUST00000175222 88 ntBASIC21.33■■□□□ 1.01
Rrp8Q9DB85 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Rrp8Q9DB85 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.33■■□□□ 1.01
Rrp8Q9DB85 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.33■■□□□ 1.01
Rrp8Q9DB85 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.33■■□□□ 1.01
Rrp8Q9DB85 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.33■■□□□ 1.01
Rrp8Q9DB85 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.33■■□□□ 1
Rrp8Q9DB85 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Rrp8Q9DB85 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rrp8Q9DB85 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rrp8Q9DB85 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rrp8Q9DB85 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.32■■□□□ 1
Rrp8Q9DB85 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rrp8Q9DB85 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.32■■□□□ 1
Rrp8Q9DB85 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Rrp8Q9DB85 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.32■■□□□ 1
Rrp8Q9DB85 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
Rrp8Q9DB85 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.32■■□□□ 1
Rrp8Q9DB85 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Rrp8Q9DB85 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rrp8Q9DB85 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rrp8Q9DB85 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rrp8Q9DB85 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rrp8Q9DB85 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rrp8Q9DB85 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rrp8Q9DB85 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Rrp8Q9DB85 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Rrp8Q9DB85 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rrp8Q9DB85 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.31■■□□□ 1
Rrp8Q9DB85 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Rrp8Q9DB85 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rrp8Q9DB85 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rrp8Q9DB85 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.3■■□□□ 1
Rrp8Q9DB85 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.3■■□□□ 1
Rrp8Q9DB85 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rrp8Q9DB85 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rrp8Q9DB85 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rrp8Q9DB85 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Rrp8Q9DB85 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
Rrp8Q9DB85 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 100.2 ms