Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssbp3Q9D032 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Ssbp3Q9D032 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.04■□□□□ 0.48
Ssbp3Q9D032 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ssbp3Q9D032 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssbp3Q9D032 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssbp3Q9D032 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.04■□□□□ 0.48
Ssbp3Q9D032 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Ssbp3Q9D032 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Ssbp3Q9D032 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.03■□□□□ 0.48
Ssbp3Q9D032 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.03■□□□□ 0.48
Ssbp3Q9D032 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.03■□□□□ 0.48
Ssbp3Q9D032 Gm45444-201ENSMUST00000211394 898 ntBASIC18.03■□□□□ 0.48
Ssbp3Q9D032 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ssbp3Q9D032 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssbp3Q9D032 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssbp3Q9D032 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssbp3Q9D032 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssbp3Q9D032 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ssbp3Q9D032 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ssbp3Q9D032 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.03■□□□□ 0.48
Ssbp3Q9D032 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ssbp3Q9D032 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Ssbp3Q9D032 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Ssbp3Q9D032 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ssbp3Q9D032 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Ssbp3Q9D032 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ssbp3Q9D032 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Ssbp3Q9D032 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Ssbp3Q9D032 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.02■□□□□ 0.47
Ssbp3Q9D032 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ssbp3Q9D032 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Ssbp3Q9D032 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ssbp3Q9D032 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ssbp3Q9D032 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ssbp3Q9D032 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Ssbp3Q9D032 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ssbp3Q9D032 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
Ssbp3Q9D032 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Ssbp3Q9D032 Gm43566-201ENSMUST00000196851 808 ntBASIC18■□□□□ 0.47
Ssbp3Q9D032 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Ssbp3Q9D032 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssbp3Q9D032 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssbp3Q9D032 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.99■□□□□ 0.47
Ssbp3Q9D032 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Ssbp3Q9D032 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssbp3Q9D032 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ssbp3Q9D032 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Ssbp3Q9D032 Gm5812-201ENSMUST00000061073 957 ntBASIC17.99■□□□□ 0.47
Ssbp3Q9D032 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Ssbp3Q9D032 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ssbp3Q9D032 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssbp3Q9D032 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ssbp3Q9D032 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Ssbp3Q9D032 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Ssbp3Q9D032 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.98■□□□□ 0.47
Ssbp3Q9D032 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Ssbp3Q9D032 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ssbp3Q9D032 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ssbp3Q9D032 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.97■□□□□ 0.47
Ssbp3Q9D032 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ssbp3Q9D032 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ssbp3Q9D032 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ssbp3Q9D032 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.96■□□□□ 0.47
Ssbp3Q9D032 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ssbp3Q9D032 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ssbp3Q9D032 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ssbp3Q9D032 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ssbp3Q9D032 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.95■□□□□ 0.46
Ssbp3Q9D032 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.95■□□□□ 0.46
Ssbp3Q9D032 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ssbp3Q9D032 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ssbp3Q9D032 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ssbp3Q9D032 Gm13238-201ENSMUST00000117655 780 ntBASIC17.94■□□□□ 0.46
Ssbp3Q9D032 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.94■□□□□ 0.46
Ssbp3Q9D032 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ssbp3Q9D032 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ssbp3Q9D032 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssbp3Q9D032 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.93■□□□□ 0.46
Ssbp3Q9D032 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ssbp3Q9D032 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ssbp3Q9D032 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Ssbp3Q9D032 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssbp3Q9D032 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssbp3Q9D032 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ssbp3Q9D032 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssbp3Q9D032 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssbp3Q9D032 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssbp3Q9D032 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssbp3Q9D032 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ssbp3Q9D032 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ssbp3Q9D032 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssbp3Q9D032 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ssbp3Q9D032 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ssbp3Q9D032 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ssbp3Q9D032 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ssbp3Q9D032 Gm15546-201ENSMUST00000122095 826 ntBASIC17.91■□□□□ 0.46
Ssbp3Q9D032 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ssbp3Q9D032 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.91■□□□□ 0.46
Ssbp3Q9D032 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms