Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
Ssu72Q9CY97 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ssu72Q9CY97 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ssu72Q9CY97 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.72■■□□□ 1.07
Ssu72Q9CY97 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ssu72Q9CY97 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
Ssu72Q9CY97 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Ssu72Q9CY97 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ssu72Q9CY97 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.71■■□□□ 1.07
Ssu72Q9CY97 Gm4799-201ENSMUST00000095396 657 ntBASIC21.71■■□□□ 1.07
Ssu72Q9CY97 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ssu72Q9CY97 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ssu72Q9CY97 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ssu72Q9CY97 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Ssu72Q9CY97 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ssu72Q9CY97 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Ssu72Q9CY97 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.69■■□□□ 1.06
Ssu72Q9CY97 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
Ssu72Q9CY97 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ssu72Q9CY97 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.69■■□□□ 1.06
Ssu72Q9CY97 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.69■■□□□ 1.06
Ssu72Q9CY97 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ssu72Q9CY97 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ssu72Q9CY97 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Ssu72Q9CY97 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.68■■□□□ 1.06
Ssu72Q9CY97 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.68■■□□□ 1.06
Ssu72Q9CY97 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.68■■□□□ 1.06
Ssu72Q9CY97 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.68■■□□□ 1.06
Ssu72Q9CY97 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ssu72Q9CY97 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ssu72Q9CY97 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ssu72Q9CY97 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.67■■□□□ 1.06
Ssu72Q9CY97 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Ssu72Q9CY97 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.66■■□□□ 1.06
Ssu72Q9CY97 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.66■■□□□ 1.06
Ssu72Q9CY97 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ssu72Q9CY97 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Ssu72Q9CY97 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Ssu72Q9CY97 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Ssu72Q9CY97 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ssu72Q9CY97 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
Ssu72Q9CY97 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ssu72Q9CY97 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.65■■□□□ 1.06
Ssu72Q9CY97 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ssu72Q9CY97 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.64■■□□□ 1.05
Ssu72Q9CY97 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.64■■□□□ 1.05
Ssu72Q9CY97 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Ssu72Q9CY97 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ssu72Q9CY97 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ssu72Q9CY97 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ssu72Q9CY97 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ssu72Q9CY97 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Ssu72Q9CY97 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Ssu72Q9CY97 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ssu72Q9CY97 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ssu72Q9CY97 Terc-201ENSMUST00000082862 423 ntBASIC21.63■■□□□ 1.05
Ssu72Q9CY97 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ssu72Q9CY97 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ssu72Q9CY97 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ssu72Q9CY97 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ssu72Q9CY97 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ssu72Q9CY97 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Ssu72Q9CY97 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.62■■□□□ 1.05
Ssu72Q9CY97 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ssu72Q9CY97 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ssu72Q9CY97 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ssu72Q9CY97 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ssu72Q9CY97 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Ssu72Q9CY97 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ssu72Q9CY97 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ssu72Q9CY97 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ssu72Q9CY97 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ssu72Q9CY97 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ssu72Q9CY97 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Ssu72Q9CY97 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Ssu72Q9CY97 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Ssu72Q9CY97 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ssu72Q9CY97 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ssu72Q9CY97 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ssu72Q9CY97 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ssu72Q9CY97 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Ssu72Q9CY97 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Ssu72Q9CY97 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.58■■□□□ 1.05
Ssu72Q9CY97 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.58■■□□□ 1.05
Ssu72Q9CY97 Mir3960-201ENSMUST00000198213 73 ntBASIC21.58■■□□□ 1.05
Ssu72Q9CY97 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ssu72Q9CY97 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Ssu72Q9CY97 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ssu72Q9CY97 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ssu72Q9CY97 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ssu72Q9CY97 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ssu72Q9CY97 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ssu72Q9CY97 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ssu72Q9CY97 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Ssu72Q9CY97 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.56■■□□□ 1.04
Ssu72Q9CY97 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ssu72Q9CY97 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.56■■□□□ 1.04
Ssu72Q9CY97 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ssu72Q9CY97 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ssu72Q9CY97 Gm6821-201ENSMUST00000107540 542 ntBASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms