Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pfdn1Q9CWM4 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pfdn1Q9CWM4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Pfdn1Q9CWM4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Pfdn1Q9CWM4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Pfdn1Q9CWM4 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Pfdn1Q9CWM4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.17■□□□□ 0.66
Pfdn1Q9CWM4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pfdn1Q9CWM4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Pfdn1Q9CWM4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pfdn1Q9CWM4 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pfdn1Q9CWM4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pfdn1Q9CWM4 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pfdn1Q9CWM4 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pfdn1Q9CWM4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pfdn1Q9CWM4 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pfdn1Q9CWM4 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pfdn1Q9CWM4 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.15■□□□□ 0.66
Pfdn1Q9CWM4 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.15■□□□□ 0.66
Pfdn1Q9CWM4 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.15■□□□□ 0.66
Pfdn1Q9CWM4 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pfdn1Q9CWM4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pfdn1Q9CWM4 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.14■□□□□ 0.65
Pfdn1Q9CWM4 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pfdn1Q9CWM4 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Pfdn1Q9CWM4 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pfdn1Q9CWM4 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pfdn1Q9CWM4 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pfdn1Q9CWM4 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Pfdn1Q9CWM4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pfdn1Q9CWM4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pfdn1Q9CWM4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pfdn1Q9CWM4 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pfdn1Q9CWM4 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pfdn1Q9CWM4 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pfdn1Q9CWM4 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Pfdn1Q9CWM4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Pfdn1Q9CWM4 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.12■□□□□ 0.65
Pfdn1Q9CWM4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.12■□□□□ 0.65
Pfdn1Q9CWM4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pfdn1Q9CWM4 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pfdn1Q9CWM4 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pfdn1Q9CWM4 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.11■□□□□ 0.65
Pfdn1Q9CWM4 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pfdn1Q9CWM4 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pfdn1Q9CWM4 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pfdn1Q9CWM4 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pfdn1Q9CWM4 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pfdn1Q9CWM4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pfdn1Q9CWM4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pfdn1Q9CWM4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pfdn1Q9CWM4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pfdn1Q9CWM4 Particl-201ENSMUST00000205370 1560 ntBASIC19.09■□□□□ 0.65
Pfdn1Q9CWM4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Pfdn1Q9CWM4 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pfdn1Q9CWM4 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pfdn1Q9CWM4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pfdn1Q9CWM4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Pfdn1Q9CWM4 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pfdn1Q9CWM4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Pfdn1Q9CWM4 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pfdn1Q9CWM4 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pfdn1Q9CWM4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pfdn1Q9CWM4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Pfdn1Q9CWM4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pfdn1Q9CWM4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pfdn1Q9CWM4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pfdn1Q9CWM4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pfdn1Q9CWM4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pfdn1Q9CWM4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Pfdn1Q9CWM4 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.05■□□□□ 0.64
Pfdn1Q9CWM4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pfdn1Q9CWM4 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pfdn1Q9CWM4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pfdn1Q9CWM4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pfdn1Q9CWM4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Pfdn1Q9CWM4 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pfdn1Q9CWM4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Pfdn1Q9CWM4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pfdn1Q9CWM4 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pfdn1Q9CWM4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pfdn1Q9CWM4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pfdn1Q9CWM4 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pfdn1Q9CWM4 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Pfdn1Q9CWM4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pfdn1Q9CWM4 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Pfdn1Q9CWM4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pfdn1Q9CWM4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pfdn1Q9CWM4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pfdn1Q9CWM4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pfdn1Q9CWM4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Pfdn1Q9CWM4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pfdn1Q9CWM4 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pfdn1Q9CWM4 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pfdn1Q9CWM4 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pfdn1Q9CWM4 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pfdn1Q9CWM4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Pfdn1Q9CWM4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pfdn1Q9CWM4 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pfdn1Q9CWM4 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.02■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms