Protein–RNA interactions for Protein: Q9CR56

Nkiras2, NF-kappa-B inhibitor-interacting Ras-like protein 2, mousemouse

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkiras2Q9CR56 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nkiras2Q9CR56 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nkiras2Q9CR56 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nkiras2Q9CR56 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkiras2Q9CR56 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nkiras2Q9CR56 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nkiras2Q9CR56 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
Nkiras2Q9CR56 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkiras2Q9CR56 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkiras2Q9CR56 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkiras2Q9CR56 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.43■□□□□ 0.7
Nkiras2Q9CR56 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkiras2Q9CR56 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.43■□□□□ 0.7
Nkiras2Q9CR56 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkiras2Q9CR56 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Nkiras2Q9CR56 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Nkiras2Q9CR56 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkiras2Q9CR56 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkiras2Q9CR56 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nkiras2Q9CR56 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkiras2Q9CR56 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkiras2Q9CR56 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkiras2Q9CR56 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Nkiras2Q9CR56 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkiras2Q9CR56 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nkiras2Q9CR56 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Nkiras2Q9CR56 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nkiras2Q9CR56 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkiras2Q9CR56 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.41■□□□□ 0.7
Nkiras2Q9CR56 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkiras2Q9CR56 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.41■□□□□ 0.7
Nkiras2Q9CR56 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkiras2Q9CR56 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.41■□□□□ 0.7
Nkiras2Q9CR56 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkiras2Q9CR56 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkiras2Q9CR56 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Nkiras2Q9CR56 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkiras2Q9CR56 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkiras2Q9CR56 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nkiras2Q9CR56 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.4■□□□□ 0.7
Nkiras2Q9CR56 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkiras2Q9CR56 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkiras2Q9CR56 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nkiras2Q9CR56 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nkiras2Q9CR56 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Nkiras2Q9CR56 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nkiras2Q9CR56 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nkiras2Q9CR56 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nkiras2Q9CR56 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nkiras2Q9CR56 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.38■□□□□ 0.69
Nkiras2Q9CR56 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Nkiras2Q9CR56 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nkiras2Q9CR56 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nkiras2Q9CR56 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nkiras2Q9CR56 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Nkiras2Q9CR56 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nkiras2Q9CR56 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkiras2Q9CR56 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkiras2Q9CR56 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nkiras2Q9CR56 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkiras2Q9CR56 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkiras2Q9CR56 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nkiras2Q9CR56 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkiras2Q9CR56 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkiras2Q9CR56 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkiras2Q9CR56 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nkiras2Q9CR56 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nkiras2Q9CR56 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Nkiras2Q9CR56 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nkiras2Q9CR56 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Nkiras2Q9CR56 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nkiras2Q9CR56 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkiras2Q9CR56 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkiras2Q9CR56 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nkiras2Q9CR56 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkiras2Q9CR56 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkiras2Q9CR56 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkiras2Q9CR56 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Nkiras2Q9CR56 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkiras2Q9CR56 Terc-201ENSMUST00000082862 423 ntBASIC19.34■□□□□ 0.69
Nkiras2Q9CR56 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkiras2Q9CR56 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.34■□□□□ 0.69
Nkiras2Q9CR56 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkiras2Q9CR56 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.34■□□□□ 0.69
Nkiras2Q9CR56 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Nkiras2Q9CR56 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nkiras2Q9CR56 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Nkiras2Q9CR56 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nkiras2Q9CR56 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nkiras2Q9CR56 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nkiras2Q9CR56 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nkiras2Q9CR56 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.33■□□□□ 0.68
Nkiras2Q9CR56 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nkiras2Q9CR56 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nkiras2Q9CR56 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Nkiras2Q9CR56 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.32■□□□□ 0.68
Nkiras2Q9CR56 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkiras2Q9CR56 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nkiras2Q9CR56 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkiras2Q9CR56 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms