Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vmp1Q99KU0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vmp1Q99KU0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.84■□□□□ 0.93
Vmp1Q99KU0 Gm12366-201ENSMUST00000121722 873 ntBASIC20.84■□□□□ 0.93
Vmp1Q99KU0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.84■□□□□ 0.93
Vmp1Q99KU0 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.84■□□□□ 0.93
Vmp1Q99KU0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.84■□□□□ 0.93
Vmp1Q99KU0 Gm5786-201ENSMUST00000085368 882 ntBASIC20.84■□□□□ 0.93
Vmp1Q99KU0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.84■□□□□ 0.93
Vmp1Q99KU0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vmp1Q99KU0 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Vmp1Q99KU0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vmp1Q99KU0 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vmp1Q99KU0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.83■□□□□ 0.93
Vmp1Q99KU0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vmp1Q99KU0 Gm27502-201ENSMUST00000183495 199 ntBASIC20.83■□□□□ 0.93
Vmp1Q99KU0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vmp1Q99KU0 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Vmp1Q99KU0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Vmp1Q99KU0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Vmp1Q99KU0 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.82■□□□□ 0.92
Vmp1Q99KU0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Vmp1Q99KU0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Vmp1Q99KU0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vmp1Q99KU0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Vmp1Q99KU0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.82■□□□□ 0.92
Vmp1Q99KU0 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vmp1Q99KU0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.82■□□□□ 0.92
Vmp1Q99KU0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vmp1Q99KU0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vmp1Q99KU0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vmp1Q99KU0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Vmp1Q99KU0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vmp1Q99KU0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.81■□□□□ 0.92
Vmp1Q99KU0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vmp1Q99KU0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vmp1Q99KU0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vmp1Q99KU0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Vmp1Q99KU0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Vmp1Q99KU0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Vmp1Q99KU0 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Vmp1Q99KU0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vmp1Q99KU0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Vmp1Q99KU0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vmp1Q99KU0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.79■□□□□ 0.92
Vmp1Q99KU0 Gm44428-201ENSMUST00000204474 874 ntBASIC20.79■□□□□ 0.92
Vmp1Q99KU0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Vmp1Q99KU0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Vmp1Q99KU0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vmp1Q99KU0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Vmp1Q99KU0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vmp1Q99KU0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vmp1Q99KU0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vmp1Q99KU0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.78■□□□□ 0.92
Vmp1Q99KU0 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.78■□□□□ 0.92
Vmp1Q99KU0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vmp1Q99KU0 Gm14523-201ENSMUST00000117260 558 ntBASIC20.77■□□□□ 0.92
Vmp1Q99KU0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.77■□□□□ 0.92
Vmp1Q99KU0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vmp1Q99KU0 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vmp1Q99KU0 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vmp1Q99KU0 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Vmp1Q99KU0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Vmp1Q99KU0 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Vmp1Q99KU0 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.76■□□□□ 0.91
Vmp1Q99KU0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Vmp1Q99KU0 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.76■□□□□ 0.91
Vmp1Q99KU0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vmp1Q99KU0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Vmp1Q99KU0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vmp1Q99KU0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.75■□□□□ 0.91
Vmp1Q99KU0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Vmp1Q99KU0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Vmp1Q99KU0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vmp1Q99KU0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vmp1Q99KU0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vmp1Q99KU0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Vmp1Q99KU0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.74■□□□□ 0.91
Vmp1Q99KU0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vmp1Q99KU0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Vmp1Q99KU0 Gm7332-201ENSMUST00000118351 454 ntBASIC20.74■□□□□ 0.91
Vmp1Q99KU0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vmp1Q99KU0 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.74■□□□□ 0.91
Vmp1Q99KU0 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Vmp1Q99KU0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vmp1Q99KU0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vmp1Q99KU0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Vmp1Q99KU0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vmp1Q99KU0 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vmp1Q99KU0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vmp1Q99KU0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.72■□□□□ 0.91
Vmp1Q99KU0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vmp1Q99KU0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vmp1Q99KU0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Vmp1Q99KU0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
Vmp1Q99KU0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vmp1Q99KU0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vmp1Q99KU0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vmp1Q99KU0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.71■□□□□ 0.91
Vmp1Q99KU0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms