Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdha8Q91Y12 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdha8Q91Y12 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Pcdha8Q91Y12 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.12■□□□□ 0.97
Pcdha8Q91Y12 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdha8Q91Y12 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdha8Q91Y12 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.11■□□□□ 0.97
Pcdha8Q91Y12 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdha8Q91Y12 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdha8Q91Y12 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha8Q91Y12 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.1■□□□□ 0.97
Pcdha8Q91Y12 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha8Q91Y12 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha8Q91Y12 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha8Q91Y12 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha8Q91Y12 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.1■□□□□ 0.97
Pcdha8Q91Y12 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha8Q91Y12 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha8Q91Y12 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdha8Q91Y12 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdha8Q91Y12 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdha8Q91Y12 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.09■□□□□ 0.97
Pcdha8Q91Y12 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdha8Q91Y12 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Pcdha8Q91Y12 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdha8Q91Y12 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Pcdha8Q91Y12 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.08■□□□□ 0.97
Pcdha8Q91Y12 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdha8Q91Y12 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdha8Q91Y12 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdha8Q91Y12 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.08■□□□□ 0.96
Pcdha8Q91Y12 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdha8Q91Y12 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdha8Q91Y12 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdha8Q91Y12 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdha8Q91Y12 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha8Q91Y12 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha8Q91Y12 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha8Q91Y12 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha8Q91Y12 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha8Q91Y12 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha8Q91Y12 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha8Q91Y12 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.05■□□□□ 0.96
Pcdha8Q91Y12 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.05■□□□□ 0.96
Pcdha8Q91Y12 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Pcdha8Q91Y12 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha8Q91Y12 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha8Q91Y12 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.04■□□□□ 0.96
Pcdha8Q91Y12 Gm27502-201ENSMUST00000183495 199 ntBASIC21.04■□□□□ 0.96
Pcdha8Q91Y12 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha8Q91Y12 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha8Q91Y12 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha8Q91Y12 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha8Q91Y12 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha8Q91Y12 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha8Q91Y12 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha8Q91Y12 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha8Q91Y12 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha8Q91Y12 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.03■□□□□ 0.96
Pcdha8Q91Y12 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdha8Q91Y12 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdha8Q91Y12 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdha8Q91Y12 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Pcdha8Q91Y12 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdha8Q91Y12 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdha8Q91Y12 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdha8Q91Y12 Gm14523-201ENSMUST00000117260 558 ntBASIC21.01■□□□□ 0.95
Pcdha8Q91Y12 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.01■□□□□ 0.95
Pcdha8Q91Y12 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Pcdha8Q91Y12 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdha8Q91Y12 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdha8Q91Y12 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Pcdha8Q91Y12 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdha8Q91Y12 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdha8Q91Y12 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdha8Q91Y12 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdha8Q91Y12 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdha8Q91Y12 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdha8Q91Y12 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdha8Q91Y12 Gm22567-201ENSMUST00000175542 342 ntBASIC21■□□□□ 0.95
Pcdha8Q91Y12 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdha8Q91Y12 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdha8Q91Y12 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdha8Q91Y12 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Pcdha8Q91Y12 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Pcdha8Q91Y12 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha8Q91Y12 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha8Q91Y12 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.99■□□□□ 0.95
Pcdha8Q91Y12 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha8Q91Y12 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Pcdha8Q91Y12 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha8Q91Y12 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha8Q91Y12 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha8Q91Y12 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha8Q91Y12 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha8Q91Y12 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha8Q91Y12 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha8Q91Y12 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.97■□□□□ 0.95
Pcdha8Q91Y12 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdha8Q91Y12 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms