Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhga4Q91XY4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.24■□□□□ 0.99
Pcdhga4Q91XY4 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhga4Q91XY4 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhga4Q91XY4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Pcdhga4Q91XY4 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhga4Q91XY4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.24■□□□□ 0.99
Pcdhga4Q91XY4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Pcdhga4Q91XY4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.24■□□□□ 0.99
Pcdhga4Q91XY4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhga4Q91XY4 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.23■□□□□ 0.99
Pcdhga4Q91XY4 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Pcdhga4Q91XY4 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhga4Q91XY4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhga4Q91XY4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhga4Q91XY4 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Pcdhga4Q91XY4 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhga4Q91XY4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhga4Q91XY4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Pcdhga4Q91XY4 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.22■□□□□ 0.99
Pcdhga4Q91XY4 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhga4Q91XY4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.22■□□□□ 0.99
Pcdhga4Q91XY4 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhga4Q91XY4 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhga4Q91XY4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhga4Q91XY4 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Pcdhga4Q91XY4 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.21■□□□□ 0.99
Pcdhga4Q91XY4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhga4Q91XY4 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhga4Q91XY4 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhga4Q91XY4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhga4Q91XY4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhga4Q91XY4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.21■□□□□ 0.99
Pcdhga4Q91XY4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhga4Q91XY4 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Pcdhga4Q91XY4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhga4Q91XY4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhga4Q91XY4 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.19■□□□□ 0.98
Pcdhga4Q91XY4 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.19■□□□□ 0.98
Pcdhga4Q91XY4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhga4Q91XY4 Gm5921-201ENSMUST00000075898 882 ntBASIC21.19■□□□□ 0.98
Pcdhga4Q91XY4 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhga4Q91XY4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Pcdhga4Q91XY4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhga4Q91XY4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
Pcdhga4Q91XY4 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhga4Q91XY4 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhga4Q91XY4 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhga4Q91XY4 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.18■□□□□ 0.98
Pcdhga4Q91XY4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhga4Q91XY4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhga4Q91XY4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhga4Q91XY4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Pcdhga4Q91XY4 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Pcdhga4Q91XY4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Pcdhga4Q91XY4 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhga4Q91XY4 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Pcdhga4Q91XY4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhga4Q91XY4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhga4Q91XY4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Pcdhga4Q91XY4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhga4Q91XY4 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhga4Q91XY4 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhga4Q91XY4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhga4Q91XY4 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.16■□□□□ 0.98
Pcdhga4Q91XY4 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhga4Q91XY4 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhga4Q91XY4 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhga4Q91XY4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhga4Q91XY4 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.15■□□□□ 0.98
Pcdhga4Q91XY4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhga4Q91XY4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhga4Q91XY4 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhga4Q91XY4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhga4Q91XY4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhga4Q91XY4 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhga4Q91XY4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Pcdhga4Q91XY4 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhga4Q91XY4 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhga4Q91XY4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Pcdhga4Q91XY4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhga4Q91XY4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Pcdhga4Q91XY4 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhga4Q91XY4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhga4Q91XY4 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhga4Q91XY4 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Pcdhga4Q91XY4 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhga4Q91XY4 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhga4Q91XY4 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhga4Q91XY4 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.11■□□□□ 0.97
Pcdhga4Q91XY4 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.11■□□□□ 0.97
Pcdhga4Q91XY4 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.11■□□□□ 0.97
Pcdhga4Q91XY4 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhga4Q91XY4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhga4Q91XY4 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhga4Q91XY4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhga4Q91XY4 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhga4Q91XY4 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhga4Q91XY4 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.1■□□□□ 0.97
Pcdhga4Q91XY4 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms