Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gm15039-201ENSMUST00000118914 875 ntBASIC25.31■■□□□ 1.64
Trex1Q91XB0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC25.31■■□□□ 1.64
Trex1Q91XB0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Trex1Q91XB0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Trex1Q91XB0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC25.3■■□□□ 1.64
Trex1Q91XB0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Trex1Q91XB0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC25.3■■□□□ 1.64
Trex1Q91XB0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC25.3■■□□□ 1.64
Trex1Q91XB0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC25.3■■□□□ 1.64
Trex1Q91XB0 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC25.29■■□□□ 1.64
Trex1Q91XB0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC25.29■■□□□ 1.64
Trex1Q91XB0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.28■■□□□ 1.64
Trex1Q91XB0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Trex1Q91XB0 Gm5131-201ENSMUST00000212776 1238 ntBASIC25.28■■□□□ 1.64
Trex1Q91XB0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Trex1Q91XB0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
Trex1Q91XB0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Trex1Q91XB0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Trex1Q91XB0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
Trex1Q91XB0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Trex1Q91XB0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Trex1Q91XB0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Trex1Q91XB0 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Trex1Q91XB0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Trex1Q91XB0 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Trex1Q91XB0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Trex1Q91XB0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC25.25■■□□□ 1.63
Trex1Q91XB0 Gm28536-201ENSMUST00000190971 1317 ntBASIC25.25■■□□□ 1.63
Trex1Q91XB0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
Trex1Q91XB0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
Trex1Q91XB0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Trex1Q91XB0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC25.24■■□□□ 1.63
Trex1Q91XB0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Trex1Q91XB0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC25.23■■□□□ 1.63
Trex1Q91XB0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC25.23■■□□□ 1.63
Trex1Q91XB0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Trex1Q91XB0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
Trex1Q91XB0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Trex1Q91XB0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Trex1Q91XB0 Nsd1-206ENSMUST00000224918 1001 ntBASIC25.22■■□□□ 1.63
Trex1Q91XB0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Trex1Q91XB0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Trex1Q91XB0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Trex1Q91XB0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Trex1Q91XB0 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Trex1Q91XB0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.63
Trex1Q91XB0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC25.2■■□□□ 1.62
Trex1Q91XB0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC25.2■■□□□ 1.62
Trex1Q91XB0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC25.2■■□□□ 1.62
Trex1Q91XB0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Trex1Q91XB0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC25.19■■□□□ 1.62
Trex1Q91XB0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Trex1Q91XB0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Trex1Q91XB0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC25.18■■□□□ 1.62
Trex1Q91XB0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Trex1Q91XB0 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Trex1Q91XB0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Trex1Q91XB0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC25.17■■□□□ 1.62
Trex1Q91XB0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC25.17■■□□□ 1.62
Trex1Q91XB0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Trex1Q91XB0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
Trex1Q91XB0 Gm28731-201ENSMUST00000185564 1569 ntBASIC25.17■■□□□ 1.62
Trex1Q91XB0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC25.16■■□□□ 1.62
Trex1Q91XB0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Trex1Q91XB0 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Trex1Q91XB0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC25.16■■□□□ 1.62
Trex1Q91XB0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Trex1Q91XB0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Trex1Q91XB0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC25.15■■□□□ 1.62
Trex1Q91XB0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Trex1Q91XB0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Trex1Q91XB0 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Trex1Q91XB0 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Trex1Q91XB0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC25.14■■□□□ 1.62
Trex1Q91XB0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Trex1Q91XB0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC25.14■■□□□ 1.62
Trex1Q91XB0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Trex1Q91XB0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Trex1Q91XB0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC25.13■■□□□ 1.61
Trex1Q91XB0 Gm7417-201ENSMUST00000192950 473 ntBASIC25.13■■□□□ 1.61
Trex1Q91XB0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC25.13■■□□□ 1.61
Trex1Q91XB0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC25.13■■□□□ 1.61
Trex1Q91XB0 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC25.13■■□□□ 1.61
Trex1Q91XB0 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Trex1Q91XB0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Trex1Q91XB0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC25.12■■□□□ 1.61
Trex1Q91XB0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Trex1Q91XB0 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Trex1Q91XB0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Trex1Q91XB0 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Trex1Q91XB0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Trex1Q91XB0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Trex1Q91XB0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC25.11■■□□□ 1.61
Trex1Q91XB0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Trex1Q91XB0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Trex1Q91XB0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC25.11■■□□□ 1.61
Trex1Q91XB0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Trex1Q91XB0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Trex1Q91XB0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Trex1Q91XB0 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms