Protein–RNA interactions for Protein: Q8VEM1

Rnf130, E3 ubiquitin-protein ligase RNF130, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf130Q8VEM1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf130Q8VEM1 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf130Q8VEM1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Rnf130Q8VEM1 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Rnf130Q8VEM1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf130Q8VEM1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.45■□□□□ 0.86
Rnf130Q8VEM1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf130Q8VEM1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf130Q8VEM1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.45■□□□□ 0.86
Rnf130Q8VEM1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf130Q8VEM1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf130Q8VEM1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf130Q8VEM1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf130Q8VEM1 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf130Q8VEM1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf130Q8VEM1 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.44■□□□□ 0.86
Rnf130Q8VEM1 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Rnf130Q8VEM1 Gm22567-201ENSMUST00000175542 342 ntBASIC20.44■□□□□ 0.86
Rnf130Q8VEM1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf130Q8VEM1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.44■□□□□ 0.86
Rnf130Q8VEM1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf130Q8VEM1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf130Q8VEM1 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf130Q8VEM1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Rnf130Q8VEM1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.43■□□□□ 0.86
Rnf130Q8VEM1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf130Q8VEM1 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.43■□□□□ 0.86
Rnf130Q8VEM1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf130Q8VEM1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf130Q8VEM1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.42■□□□□ 0.86
Rnf130Q8VEM1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.42■□□□□ 0.86
Rnf130Q8VEM1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf130Q8VEM1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Rnf130Q8VEM1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf130Q8VEM1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf130Q8VEM1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf130Q8VEM1 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf130Q8VEM1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.41■□□□□ 0.86
Rnf130Q8VEM1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf130Q8VEM1 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf130Q8VEM1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf130Q8VEM1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.4■□□□□ 0.86
Rnf130Q8VEM1 Gm44428-201ENSMUST00000204474 874 ntBASIC20.4■□□□□ 0.86
Rnf130Q8VEM1 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf130Q8VEM1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
Rnf130Q8VEM1 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.4■□□□□ 0.86
Rnf130Q8VEM1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf130Q8VEM1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf130Q8VEM1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.4■□□□□ 0.86
Rnf130Q8VEM1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rnf130Q8VEM1 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.39■□□□□ 0.86
Rnf130Q8VEM1 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.39■□□□□ 0.86
Rnf130Q8VEM1 Scarna2-201ENSMUST00000157560 414 ntBASIC20.39■□□□□ 0.85
Rnf130Q8VEM1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Rnf130Q8VEM1 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Rnf130Q8VEM1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf130Q8VEM1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf130Q8VEM1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf130Q8VEM1 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf130Q8VEM1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf130Q8VEM1 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf130Q8VEM1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf130Q8VEM1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.38■□□□□ 0.85
Rnf130Q8VEM1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf130Q8VEM1 Gm16437-201ENSMUST00000025669 507 ntBASIC20.37■□□□□ 0.85
Rnf130Q8VEM1 Gm9806-201ENSMUST00000051080 552 ntBASIC20.37■□□□□ 0.85
Rnf130Q8VEM1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf130Q8VEM1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf130Q8VEM1 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf130Q8VEM1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf130Q8VEM1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.36■□□□□ 0.85
Rnf130Q8VEM1 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.36■□□□□ 0.85
Rnf130Q8VEM1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf130Q8VEM1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf130Q8VEM1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf130Q8VEM1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf130Q8VEM1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf130Q8VEM1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf130Q8VEM1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf130Q8VEM1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.35■□□□□ 0.85
Rnf130Q8VEM1 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf130Q8VEM1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf130Q8VEM1 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf130Q8VEM1 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf130Q8VEM1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.34■□□□□ 0.85
Rnf130Q8VEM1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf130Q8VEM1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.34■□□□□ 0.85
Rnf130Q8VEM1 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf130Q8VEM1 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf130Q8VEM1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf130Q8VEM1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Rnf130Q8VEM1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Rnf130Q8VEM1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Rnf130Q8VEM1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rnf130Q8VEM1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Rnf130Q8VEM1 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Rnf130Q8VEM1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf130Q8VEM1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf130Q8VEM1 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf130Q8VEM1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms