Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.35■□□□□ 0.69
Ccdc58Q8R3Q6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc58Q8R3Q6 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ccdc58Q8R3Q6 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc58Q8R3Q6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc58Q8R3Q6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc58Q8R3Q6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc58Q8R3Q6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc58Q8R3Q6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc58Q8R3Q6 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc58Q8R3Q6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc58Q8R3Q6 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc58Q8R3Q6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc58Q8R3Q6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc58Q8R3Q6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc58Q8R3Q6 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Ccdc58Q8R3Q6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.33■□□□□ 0.68
Ccdc58Q8R3Q6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc58Q8R3Q6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc58Q8R3Q6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc58Q8R3Q6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc58Q8R3Q6 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.32■□□□□ 0.68
Ccdc58Q8R3Q6 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.32■□□□□ 0.68
Ccdc58Q8R3Q6 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc58Q8R3Q6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ccdc58Q8R3Q6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc58Q8R3Q6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc58Q8R3Q6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.32■□□□□ 0.68
Ccdc58Q8R3Q6 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Ccdc58Q8R3Q6 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc58Q8R3Q6 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Ccdc58Q8R3Q6 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Ccdc58Q8R3Q6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc58Q8R3Q6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.31■□□□□ 0.68
Ccdc58Q8R3Q6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc58Q8R3Q6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ccdc58Q8R3Q6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc58Q8R3Q6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc58Q8R3Q6 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ccdc58Q8R3Q6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.3■□□□□ 0.68
Ccdc58Q8R3Q6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.3■□□□□ 0.68
Ccdc58Q8R3Q6 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.3■□□□□ 0.68
Ccdc58Q8R3Q6 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.3■□□□□ 0.68
Ccdc58Q8R3Q6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc58Q8R3Q6 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc58Q8R3Q6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc58Q8R3Q6 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.29■□□□□ 0.68
Ccdc58Q8R3Q6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ccdc58Q8R3Q6 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.29■□□□□ 0.68
Ccdc58Q8R3Q6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc58Q8R3Q6 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ccdc58Q8R3Q6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc58Q8R3Q6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc58Q8R3Q6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc58Q8R3Q6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc58Q8R3Q6 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc58Q8R3Q6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc58Q8R3Q6 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc58Q8R3Q6 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc58Q8R3Q6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc58Q8R3Q6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.26■□□□□ 0.67
Ccdc58Q8R3Q6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc58Q8R3Q6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc58Q8R3Q6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc58Q8R3Q6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.26■□□□□ 0.67
Ccdc58Q8R3Q6 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc58Q8R3Q6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc58Q8R3Q6 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc58Q8R3Q6 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc58Q8R3Q6 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc58Q8R3Q6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc58Q8R3Q6 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.25■□□□□ 0.67
Ccdc58Q8R3Q6 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.24■□□□□ 0.67
Ccdc58Q8R3Q6 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc58Q8R3Q6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc58Q8R3Q6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ccdc58Q8R3Q6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc58Q8R3Q6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc58Q8R3Q6 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc58Q8R3Q6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc58Q8R3Q6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Ccdc58Q8R3Q6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.23■□□□□ 0.67
Ccdc58Q8R3Q6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc58Q8R3Q6 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc58Q8R3Q6 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ccdc58Q8R3Q6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc58Q8R3Q6 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc58Q8R3Q6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Ccdc58Q8R3Q6 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc58Q8R3Q6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc58Q8R3Q6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.22■□□□□ 0.67
Ccdc58Q8R3Q6 Gm22567-201ENSMUST00000175542 342 ntBASIC19.22■□□□□ 0.67
Ccdc58Q8R3Q6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc58Q8R3Q6 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc58Q8R3Q6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc58Q8R3Q6 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc58Q8R3Q6 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc58Q8R3Q6 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc58Q8R3Q6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc58Q8R3Q6 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms