Protein–RNA interactions for Protein: Q8K3G5

Vrk3, Inactive serine/threonine-protein kinase VRK3, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk3Q8K3G5 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vrk3Q8K3G5 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vrk3Q8K3G5 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vrk3Q8K3G5 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vrk3Q8K3G5 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.33■□□□□ 0.53
Vrk3Q8K3G5 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
Vrk3Q8K3G5 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Vrk3Q8K3G5 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Vrk3Q8K3G5 Gm16437-201ENSMUST00000025669 507 ntBASIC18.33■□□□□ 0.52
Vrk3Q8K3G5 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vrk3Q8K3G5 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vrk3Q8K3G5 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.33■□□□□ 0.52
Vrk3Q8K3G5 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vrk3Q8K3G5 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vrk3Q8K3G5 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vrk3Q8K3G5 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vrk3Q8K3G5 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.32■□□□□ 0.52
Vrk3Q8K3G5 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.32■□□□□ 0.52
Vrk3Q8K3G5 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vrk3Q8K3G5 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vrk3Q8K3G5 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Vrk3Q8K3G5 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Vrk3Q8K3G5 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.31■□□□□ 0.52
Vrk3Q8K3G5 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.31■□□□□ 0.52
Vrk3Q8K3G5 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vrk3Q8K3G5 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vrk3Q8K3G5 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vrk3Q8K3G5 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vrk3Q8K3G5 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vrk3Q8K3G5 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vrk3Q8K3G5 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vrk3Q8K3G5 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.3■□□□□ 0.52
Vrk3Q8K3G5 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
Vrk3Q8K3G5 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vrk3Q8K3G5 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Vrk3Q8K3G5 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vrk3Q8K3G5 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vrk3Q8K3G5 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vrk3Q8K3G5 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Vrk3Q8K3G5 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vrk3Q8K3G5 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.28■□□□□ 0.52
Vrk3Q8K3G5 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.28■□□□□ 0.52
Vrk3Q8K3G5 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Vrk3Q8K3G5 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vrk3Q8K3G5 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vrk3Q8K3G5 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.28■□□□□ 0.52
Vrk3Q8K3G5 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Vrk3Q8K3G5 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vrk3Q8K3G5 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Vrk3Q8K3G5 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vrk3Q8K3G5 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Vrk3Q8K3G5 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.27■□□□□ 0.52
Vrk3Q8K3G5 Gm9806-201ENSMUST00000051080 552 ntBASIC18.27■□□□□ 0.52
Vrk3Q8K3G5 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vrk3Q8K3G5 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vrk3Q8K3G5 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.27■□□□□ 0.51
Vrk3Q8K3G5 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vrk3Q8K3G5 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.27■□□□□ 0.51
Vrk3Q8K3G5 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vrk3Q8K3G5 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vrk3Q8K3G5 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vrk3Q8K3G5 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Vrk3Q8K3G5 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.26■□□□□ 0.51
Vrk3Q8K3G5 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vrk3Q8K3G5 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vrk3Q8K3G5 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vrk3Q8K3G5 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Vrk3Q8K3G5 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vrk3Q8K3G5 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.25■□□□□ 0.51
Vrk3Q8K3G5 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vrk3Q8K3G5 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vrk3Q8K3G5 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vrk3Q8K3G5 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Vrk3Q8K3G5 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vrk3Q8K3G5 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vrk3Q8K3G5 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vrk3Q8K3G5 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vrk3Q8K3G5 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vrk3Q8K3G5 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vrk3Q8K3G5 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vrk3Q8K3G5 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vrk3Q8K3G5 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vrk3Q8K3G5 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vrk3Q8K3G5 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Vrk3Q8K3G5 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vrk3Q8K3G5 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.23■□□□□ 0.51
Vrk3Q8K3G5 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.23■□□□□ 0.51
Vrk3Q8K3G5 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vrk3Q8K3G5 Gm22567-201ENSMUST00000175542 342 ntBASIC18.23■□□□□ 0.51
Vrk3Q8K3G5 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vrk3Q8K3G5 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Vrk3Q8K3G5 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.22■□□□□ 0.51
Vrk3Q8K3G5 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vrk3Q8K3G5 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vrk3Q8K3G5 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vrk3Q8K3G5 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vrk3Q8K3G5 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vrk3Q8K3G5 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Vrk3Q8K3G5 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Vrk3Q8K3G5 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms