Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rab43Q8CG50 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.32■■□□□ 1
Rab43Q8CG50 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rab43Q8CG50 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rab43Q8CG50 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rab43Q8CG50 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
Rab43Q8CG50 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rab43Q8CG50 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rab43Q8CG50 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rab43Q8CG50 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.31■■□□□ 1
Rab43Q8CG50 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.31■■□□□ 1
Rab43Q8CG50 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
Rab43Q8CG50 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Rab43Q8CG50 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rab43Q8CG50 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.3■■□□□ 1
Rab43Q8CG50 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Rab43Q8CG50 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rab43Q8CG50 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.29■■□□□ 1
Rab43Q8CG50 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Rab43Q8CG50 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rab43Q8CG50 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rab43Q8CG50 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rab43Q8CG50 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rab43Q8CG50 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.28■■□□□ 1
Rab43Q8CG50 Gm7417-201ENSMUST00000192950 473 ntBASIC21.28■■□□□ 1
Rab43Q8CG50 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.28■■□□□ 1
Rab43Q8CG50 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Rab43Q8CG50 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rab43Q8CG50 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Rab43Q8CG50 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rab43Q8CG50 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.27■■□□□ 1
Rab43Q8CG50 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rab43Q8CG50 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.27■■□□□ 1
Rab43Q8CG50 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rab43Q8CG50 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rab43Q8CG50 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.27■□□□□ 0.99
Rab43Q8CG50 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rab43Q8CG50 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Rab43Q8CG50 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rab43Q8CG50 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rab43Q8CG50 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.26■□□□□ 0.99
Rab43Q8CG50 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.26■□□□□ 0.99
Rab43Q8CG50 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rab43Q8CG50 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rab43Q8CG50 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Rab43Q8CG50 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rab43Q8CG50 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rab43Q8CG50 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rab43Q8CG50 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rab43Q8CG50 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rab43Q8CG50 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Rab43Q8CG50 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rab43Q8CG50 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.24■□□□□ 0.99
Rab43Q8CG50 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rab43Q8CG50 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rab43Q8CG50 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rab43Q8CG50 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rab43Q8CG50 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rab43Q8CG50 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Rab43Q8CG50 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.23■□□□□ 0.99
Rab43Q8CG50 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rab43Q8CG50 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rab43Q8CG50 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Rab43Q8CG50 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rab43Q8CG50 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.22■□□□□ 0.99
Rab43Q8CG50 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rab43Q8CG50 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rab43Q8CG50 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rab43Q8CG50 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Rab43Q8CG50 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Rab43Q8CG50 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rab43Q8CG50 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rab43Q8CG50 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rab43Q8CG50 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rab43Q8CG50 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rab43Q8CG50 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.21■□□□□ 0.99
Rab43Q8CG50 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.21■□□□□ 0.99
Rab43Q8CG50 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rab43Q8CG50 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rab43Q8CG50 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Rab43Q8CG50 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rab43Q8CG50 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.2■□□□□ 0.98
Rab43Q8CG50 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.2■□□□□ 0.98
Rab43Q8CG50 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Rab43Q8CG50 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rab43Q8CG50 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rab43Q8CG50 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.19■□□□□ 0.98
Rab43Q8CG50 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Rab43Q8CG50 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.19■□□□□ 0.98
Rab43Q8CG50 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.19■□□□□ 0.98
Rab43Q8CG50 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.19■□□□□ 0.98
Rab43Q8CG50 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rab43Q8CG50 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rab43Q8CG50 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rab43Q8CG50 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rab43Q8CG50 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rab43Q8CG50 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rab43Q8CG50 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rab43Q8CG50 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.17■□□□□ 0.98
Rab43Q8CG50 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms